Protein Alignment CG12288 and Elavl3

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_034617.1
• Gene: Elavl3 / 15571
• MGIID: 109157
• Length: 367
• Species: Mus musculus
• Alignment Length: 213
• Identity: 48/213 - (22%)
• Similarity: 88/213 - (41%)
• Gaps: 42/213 - (19%)

  Fly   152 EEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAY--VVLEK 214
            :..:.:.|..||.|..:.:...||...|.::|.:|           .:.|:.|....|  |....
Mouse    36 DSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKL-----------VRDKITGQSLGYGFVNYSD 89

  Fly   215 PEIAQQAL-ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLRE 278
            |..|.:|: .|||.:.:...::|:         .|:....|.:||  .::|..|..:.:::::.:
Mouse    90 PNDADKAINTLNGLKLQTKTIKVS---------YARPSSASIRDA--NLYVSGLPKTMSQKEMEQ 143

  Fly   279 IFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALELNQTLLDDRPINVERYQVKKLGAK 342
            :||..|.|...|.|.|...| .:||.::.|.|      .:|..:.:   :.:|.:    |.|||
Mouse   144 LFSQYGRIITSRILLDQATGVSRGVGFIRFDK------RIEAEEAI---KGLNGQ----KPLGA- 194

  Fly   343 QVRDAAAASAASKTSSKT 360
              .:......|:..|.||
Mouse   195 --AEPITVKFANNPSQKT 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	19/84 (23%)
		RRM_SF	261..332	CDD:302621	16/71 (23%)
Elavl3	NP_034617.1	ELAV_HUD_SF	36..366	CDD:273741	48/213 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920