DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and SC35

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_061513963.1 Gene:SC35 / 1279150 VectorBaseID:AGAMI1_006283 Length:167 Species:Anopheles gambiae


Alignment Length:156 Identity:37/156 - (23%)
Similarity:67/156 - (42%) Gaps:25/156 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   251 KQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQD-GDKGCKGVAYVCF-QKPDAV 313
            :.|...|...::.|.:|.|..|.:.||.:|..|||:..|...:| ..:..:|.|:|.| .|.||.
Mosquito     6 RPPPRIDGMISLKVDNLTYRTTPDDLRRVFERCGEVGDIYIPRDRHTRESRGFAFVRFYDKRDAE 70

  Fly   314 GLALELNQTLLDDRPINVE---------------RYQVKKLGAKQVRDAAAASAAS-----KTSS 358
            .....::..:||.|.:.|:               ||..::.|..:.|....:.:.|     ::.|
Mosquito    71 DALDAMDGRMLDGRELRVQMARYGRPTSPQRRGNRYNGRERGRSRERHRRRSRSRSPEHRRRSYS 135

  Fly   359 KTKAKNQNSAGAKKRLDKKKGKENGS 384
            ::|::...|....|   ..:||::.|
Mosquito   136 RSKSRTPRSRSGSK---SSRGKDSRS 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828
RRM_SF 261..332 CDD:473069 22/72 (31%)
SC35XP_061513963.1 None
Blue background indicates that the domain is not in the aligned region.

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