DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and LOC1273839

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_312861.5 Gene:LOC1273839 / 1273839 VectorBaseID:AGAMI1_013858 Length:452 Species:Anopheles gambiae


Alignment Length:434 Identity:95/434 - (21%)
Similarity:166/434 - (38%) Gaps:114/434 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 KKQQNKLAPKEIKTEPEAQVKVESKATKK---EKVEKEPTTAPNEKPKGKVSKKAKANAN--NKD 140
            :|:||:.|...:.    .:|.:::|..|:   ...|.:|:.|..|    :|.|...:|..  ..|
Mosquito    18 RKRQNRQAVLGML----KKVDIKNKGLKRFFYFTYEADPSAAKQE----QVKKLYFSNGEICEGD 74

  Fly   141 EEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQR---KV 202
            |..::.::      .:|||.|:|..||:.:|.:|||.||:|.||.|||.||:.:...:.:   :.
Mosquito    75 EYFLQHMK------KSVFVSNIPGGTKKSELYQLFQRYGMVLSIELRTRGGRNIVGRQPQYPFET 133

  Fly   203 AGSLNAYVVLEKPEIAQQAL----------------ALNGS------------------------ 227
            ...|.:.:..:.||.|:.|.                :|.|:                        
Mosquito   134 GPYLCSTIEFDSPESAKNACEVKTESTYSAKPIMNPSLLGTENCVYVENVPAATTRQELWQHFKM 198

  Fly   228 ---------EFKENHLRVTPASMAE--------KFGQAKDKQPSDKDAKRTIF--------VGSL 267
                     ||.:..|.:|.|..|:        :|.:..:.:.:.|...|:.|        :...
Mosquito   199 FGPIRSIRMEFPDGTLVLTDAEYAQLRSVNCHIRFRRRAEARAAAKGLNRSTFKERQISVQMAYQ 263

  Fly   268 KYSATEE----QLREIFSSCGEI---DYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQTLLD 325
            ||...:|    .||..|...|::   |.|...:.|        ||||:.|....|....||....
Mosquito   264 KYCNPDELSNNALRIFFQPFGDVVALDQIPHQRAG--------YVCFKLPIPADLLKRANQQTFR 320

  Fly   326 DRPINVERYQVKKLGAKQVRDAAAASAASKTSSK--TKAKNQNSAGAKKRLDKKKGKENGSLKKE 388
            .|.|.:|:..:..: .|:.:..|.|:..:..:.:  |......|:|:....:..:|   ||..  
Mosquito   321 RRRITIEKLDLPGI-PKEGKSVAKAALGNGKNGREGTNPPGNGSSGSSNTNNSNRG---GSAT-- 379

  Fly   389 GAPTGQKKKSEYRGVKVDGIKKAKKPKKKSNDQ--QTALAKKIA 430
             ..||...||......:. ||..:|..:|:...  :..|||:::
Mosquito   380 -TTTGASSKSAPTNHAIQ-IKLGRKIARKALPPAGRKPLAKRVS 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828 31/132 (23%)
RRM_SF 261..332 CDD:473069 21/85 (25%)
LOC1273839XP_312861.5 None

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