DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and SRSF10

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_473357.1 Gene:SRSF10 / 10772 HGNCID:16713 Length:262 Species:Homo sapiens


Alignment Length:283 Identity:53/283 - (18%)
Similarity:106/283 - (37%) Gaps:54/283 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 STVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQ 219
            :::||.|:..:|:...|.:.|..||.:..:.:..    ..:..:.|..     |||..|....|:
Human    10 TSLFVRNVADDTRSEDLRREFGRYGPIVDVYVPL----DFYTRRPRGF-----AYVQFEDVRDAE 65

  Fly   220 QALALNGSEFKENHLR--VTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSS 282
            .||        .|..|  :....:..:|.|...|.|:...||               :.|.::||
Human    66 DAL--------HNLDRKWICGRQIEIQFAQGDRKTPNQMKAK---------------EGRNVYSS 107

  Fly   283 CGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELN----QTLLDDRPINVERYQVKKLGAKQ 343
            ....||.|..:...:.        :::..:...:.:.|    .:..:.||....|.........:
Human   108 SRYDDYDRYRRSRSRS--------YERRRSRSRSFDYNYRRSYSPRNSRPTGRPRRSRSHSDNDR 164

  Fly   344 VRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGSLKKEGAPTGQKKKSEYR-GVKVDG 407
            .:....:.:.||::|::::|:|    .||.:..|....:.|..|....:....|:.|: |.:.:.
Human   165 FKHRNRSFSRSKSNSRSRSKSQ----PKKEMKAKSRSRSASHTKTRGTSKTDSKTHYKSGSRYEK 225

  Fly   408 IKKAKKP---KKKSNDQQTALAK 427
            ..:.|:|   |.:|..|..:.:|
Human   226 ESRKKEPPRSKSQSRSQSRSRSK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828 18/82 (22%)
RRM_SF 261..332 CDD:473069 9/74 (12%)
SRSF10NP_473357.1 RRM_SF 5..99 CDD:473069 22/105 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 116..262 23/145 (16%)

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