Protein Alignment CG12288 and Sf3b4

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_694693.1
• Gene: Sf3b4 / 107701
• MGIID: 109580
• Length: 424
• Species: Mus musculus
• Alignment Length: 225
• Identity: 64/225 - (28%)
• Similarity: 94/225 - (41%)
• Gaps: 32/225 - (14%)

  Fly   155 STVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLE--KPEI 217
            :||:||.|........|.:||...|.|.:..:           .:.:|.|....|..:|  ..|.
Mouse    13 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-----------PKDRVTGQHQGYGFVEFLSEED 66

  Fly   218 AQQAL-ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFS 281
            |..|: .:|..:.....:||..||...|          :.|....||:|:|.....|:.|.:.||
Mouse    67 ADYAIKIMNMIKLYGKPIRVNKASAHNK----------NLDVGANIFIGNLDPEIDEKLLYDTFS 121

  Fly   282 SCGEI-DYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALE-LNQTLLDDRPINVERYQVKKLGAKQ 343
            :.|.| ...:.::|.|.| .||.|::.|...||...|:| :|...|.:|||.|. |..|| .:|.
Mouse   122 AFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVS-YAFKK-DSKG 184

  Fly   344 VRDAAAAS---AASKTSSKTKAKNQNSAGA 370
            .|..:||.   ||....|:....:|..|.|
Mouse   185 ERHGSAAERLLAAQNPLSQADRPHQLFADA 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	19/84 (23%)
		RRM_SF	261..332	CDD:302621	26/73 (36%)
Sf3b4	NP_694693.1	RRM1_SF3B4	15..88	CDD:409771	19/83 (23%)
		RRM2_SF3B4	99..181	CDD:409772	30/83 (36%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	207..424		3/8 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910