DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6012 and dhs-27

DIOPT Version :10

Sequence 1:NP_609817.1 Gene:CG6012 / 35022 FlyBaseID:FBgn0032615 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_508591.3 Gene:dhs-27 / 180632 WormBaseID:WBGene00000990 Length:320 Species:Caenorhabditis elegans


Alignment Length:294 Identity:84/294 - (28%)
Similarity:138/294 - (46%) Gaps:14/294 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSAFLTFVGVYALSSYL-YEQLRTPYKLIK--IRYFSGTRPTLKERFGDWAAVTGASDGIGKEYA 66
            :|..|.....:|::||: ...|:..|.:.|  :.:|...:..|......|..:||.:|||||.|.
 Worm     1 MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLVHFITPKHDLDYLKDTWTVITGGTDGIGKAYI 65

  Fly    67 KELARQN--INVVLIARTEEKLQAVAKEIADCGAGVQTKIVIADFTKGSQVYEHIEKETANIPIS 129
            :||.:..  ....||.|..:||....||:.: ..|.:....:.||.|..  ...:.|:...:.:.
 Worm    66 EELCKTRGLKKFYLIGRNIDKLNNTKKELVE-QHGCEVMCHVHDFEKDD--LSALPKDLETLDVG 127

  Fly   130 ILVNNVGIATPK---SLLKYNQEETQNIIDTNVVAVSQLSRIFFQRMKASKLKGAIVNVGSGTEL 191
            ||:|..||| |.   :|.:..:.....|:..|:::..:::.:....| ..|.:|.|||:.|.|..
 Worm   128 ILINCAGIA-PHIIGTLTELPEGLASKILRVNLMSAVKMTEMILPNM-VKKKRGIIVNISSMTGW 190

  Fly   192 QPLPNGAYYAASKAYTRSLTLALYHEAKPYGIHVQMLSPNFVVTKINSYSRQIMKGGLLIPSASA 256
            :|||..:.|.||||.....:.:|..|.:..||.||.|.|..|.||:.||..: ....:.:.:...
 Worm   191 RPLPYLSSYPASKAALSFFSDSLSDEYRGTGIRVQCLIPMLVATKVASYEAE-EANNIFVVTPEN 254

  Fly   257 YAKSAVNQLRDEVDETPGYLWHHVQNAVATAFTW 290
            :||.||..:....:.|.|.:.|.||.|:.|.|::
 Worm   255 FAKQAVRIIGTNWEITTGCVQHDVQVALGTLFSF 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6012NP_609817.1 17beta-HSD1_like_SDR_c 49..296 CDD:187614 74/247 (30%)
dhs-27NP_508591.3 17beta-HSD1_like_SDR_c 48..294 CDD:187614 74/247 (30%)

Return to query results.
Submit another query.