DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl9 and nep-4

DIOPT Version :9

Sequence 1:NP_609815.1 Gene:Nepl9 / 35020 FlyBaseID:FBgn0032613 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_509156.2 Gene:nep-4 / 183746 WormBaseID:WBGene00016896 Length:437 Species:Caenorhabditis elegans


Alignment Length:668 Identity:104/668 - (15%)
Similarity:188/668 - (28%) Gaps:305/668 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 FSHLYKSNLQQLVKIKNDSMDPCDDFYAHAC--GNFDQTKEENSDDFLPPYLYNKQDRMNFFTAE 104
            :.|.:......|.||.:...|||||||.|||  |:.        :|.:...:...:|.:|....:
 Worm    16 YEHPFDFIENALEKIVDWKSDPCDDFYRHACPVGSI--------EDIIKVSMQPLKDALNHSWKQ 72

  Fly   105 VGNFETIPGRLISQLYTECRKREERNVFTPTRLTSHWERMLDEIPFLARHKEVLSSWPFLKHQWE 169
            .|                  :|.|..|:......||                             
 Worm    73 KG------------------QRNEGKVYNINFRRSH----------------------------- 90

  Fly   170 RRRLYGQLNWIVLSAQLAAHGLPTLLHIYFALD---TIYVSPMEELPCPSIADFQSSLSDVLEGR 231
                            :..|....||.||:...   ..||:..:.:..|.....:::::|.:...
 Worm    91 ----------------ICCHFFCKLLFIYYDYQYRFINYVTFYDGMLQPLYYHVEANVTDGINEI 139

  Fly   232 HHQVSRIISHEMRVLCREMRGELPLVRSLSQNTRTNTSRPGEEQLLLDENTMDYFQQYFAALNFS 296
            |..:.                                                            
 Worm   140 HQMME------------------------------------------------------------ 144

  Fly   297 EERLVGARKFPLDVEKITQAWEVLRHTETRIVYNYVMWQAREQLRYPDCYRVSEEFERLLHAEYW 361
                        |:.::...|  |..|.         |.....|        :||.:.:.:|   
 Worm   145 ------------DMVELGNIW--LEKTP---------WVINNNL--------TEEMKNITNA--- 175

  Fly   362 QWHVLRRHLSREVALASYQLHTTRFQKLRRSKLSRRDWYGHLWPASVEKKELQVARILQNHAENY 426
                    :...|:|..|    |.|                            :..:|.....::
 Worm   176 --------IKMPVSLTKY----TNF----------------------------IYNLLSPIETDF 200

  Fly   427 LNITELNENYEGLKLEKNS----FYANLLILRRAQLRHSFVSPYVDEEDVNQPAYFLRHFLHFVL 487
            ||..   ..:||  ::.|:    ||:..:.:|   .|.|:   ::|:...|........|     
 Worm   201 LNCV---SEFEG--IQNNTLFCLFYSAKIFVR---TRGSY---FIDDNGYNAEGTIYFGF----- 249

  Fly   488 LSLHRPTYHYYATHGLELWRESRL------------------LLDTDG--HYT--AMDCLERQSF 530
                 |.| |:.|:|  .||.|:|                  .::.||  :::  |.||::.|..
 Worm   250 -----PNY-YHTTYG--NWRASKLGYTGTRVGHEIGHTFIEHSINPDGLPYFSKPAEDCVQNQYL 306

  Fly   531 ----QHYDAKLAPIYRPLGSHEIAEIFQFYRSFQYSLTDYHFWLQGERFAFAETFVL-------- 583
                ::|:               .|:.....:..|:..|....:.|.:.|:|   :|        
 Worm   307 KTCNEYYE---------------GEVPDACNTSDYTFDDNGADVFGLQLAYA---ILERDLSDQL 353

  Fly   584 ----DYFGLNPHRVLFYAVAQQLCNRQTEIFAAQLNRGYMN--------LPEFQEAFKCGAEKAM 636
                |...:...::|||:.|.:.| |.::......:..:.|        :|.||:||.|.::..|
 Worm   354 REQADGLKITNEQLLFYSFAYRFC-RGSKSNTTDGSHSHHNVRINAVAQMPGFQQAFNCASDSRM 417

  Fly   637 --NPPSRCMINMCERPHT 652
              :...:|:|.....|.|
 Worm   418 MKSATKQCVIYGNNAPET 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl9NP_609815.1 GluZincin 62..>84 CDD:301352 11/23 (48%)
GluZincin <579..642 CDD:301352 16/84 (19%)
nep-4NP_509156.2 GluZincin 250..425 CDD:387391 38/196 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.