DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl9 and nep-3

DIOPT Version :9

Sequence 1:NP_609815.1 Gene:Nepl9 / 35020 FlyBaseID:FBgn0032613 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:670 Identity:130/670 - (19%)
Similarity:258/670 - (38%) Gaps:186/670 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LQQLVKIKNDSMDPCDDFYAHACGNFDQ----------TKEENSDDFLPPYLYNKQDRMNFFTAE 104
            :.||:..::.|:|||::||..|||.:::          .|::.....:..:|:..|..    |::
 Worm    71 VHQLLNFQDPSVDPCENFYQAACGKYNEHNVIDGSRTAQKQQIVKRLIRDFLHKNQSS----TSK 131

  Fly   105 VGNFETIPGRLISQLYTECRKREERNVFTPTRLTSHWERMLDEIPFLARHKEVLSSWPFLKHQWE 169
            ..|       .:..||.:|::.:...|...       :.:|.|| |:...|  :.|||.|...|:
 Worm   132 SEN-------SMKLLYEKCKEAKTIKVLGN-------QNLLQEI-FMNIQK--IGSWPVLDENWD 179

  Fly   170 RRRLYGQLNWIVLSAQLAAHGLPT--LLHIYFALDT-IYVSPMEELPCPSIADFQSSLSDVLE-- 229
            .::.  .||.::||  |...|:..  ...|..:.|. :.:.|....|.      :.:|||::.  
 Worm   180 GKKF--NLNEMLLS--LIRLGVSNFGFFEIIISSDAFVEIKPARNFPT------RENLSDIISKV 234

  Fly   230 --GRHHQVS-RIISHEMRV---LCREMRGELPLVRSLSQNTRTNTSRPGEEQLLLDENTMDYFQQ 288
              |...|.: ..|.:::|.   |.||::....|:::....:..|                     
 Worm   235 FLGNGFQPNITAIENDLREYENLQRELKSLERLIQTTPNRSLVN--------------------- 278

  Fly   289 YFAALNFSEERLVGARKFPLD-VEKITQAWEVLRHTETRI-VYNYVMWQAREQLRY-----PDCY 346
             :...|:.:..::..::.|.: .|.:  ..:.|....||: |.|::   .:|..:|     .|  
 Worm   279 -YLIFNYLKSVMLEYKRLPEEQCEGV--VIDFLPRASTRVFVQNFL---DKENRKYVAGMIED-- 335

  Fly   347 RVSEEFERLLHAEYWQWHVLRRHLSREVALASYQLHTTRFQKLR--RSKLSRRDWYGHLWPASVE 409
             |...|..::....|     ....|::||:          ||::  :|.:...|::..  |.:::
 Worm   336 -VKMGFIDMIQESTW-----LNEESKKVAV----------QKVKNIKSMIGYPDFFEP--PGTLD 382

  Fly   410 K--KELQVARILQNHA-----ENYLN-------ITELNENYEGLKLEKNSFYANLLILRRAQLRH 460
            :  |:|.:.:....|.     :.:.|       .:|:..:.....|..|:||.|...|       
 Worm   383 RSFKDLNIEQTDSYHTIVRKIQKFTNEQCMEFVASEIPLDPRQPILHANAFYQNTNFL------- 440

  Fly   461 SFVSPYVDEE--DVNQPAYFLRHFLHFVLLS--LHRPTYHYYATHGL--------ELWRESRLLL 513
            :.::|.:|:.  |...|.|     ::..::.  |.....|.:...|:        .:|....   
 Worm   441 AILAPVLDDPIFDTTFPRY-----VNLAVIGNVLAHEIGHAFDHTGINYDDAGQQRIWLTPE--- 497

  Fly   514 DTDGHYTAMDCLERQSFQHYDAKLAPIYRPL-GS---HEIAE----IFQFYRSF-QYSLTDYHFW 569
            |::.:...:.||.||..::.|....   |.| ||   |||:.    :...:|:| :..|::    
 Worm   498 DSEEYGKRLRCLLRQHDEYDDPDFG---RNLNGSKTLHEISADRFGVEAAWRTFKKLDLSN---- 555

  Fly   570 LQGERFAFAETFVLDYFGLNPHRVLFYAVAQQLCNRQ--TEI-FAAQ---------LNRGYMNLP 622
                     |:.::.:...|..::.|...|...|.::  |:: :|.|         :|..|.|:|
 Worm   556 ---------ESEIVGFQNFNIDQLYFRTAALIWCRQRDTTDLQYALQREHPTNNFRVNGIYANMP 611

  Fly   623 EFQEAFKCGAEKAMNPPSRC 642
            :|.|.|.|.....|||..:|
 Worm   612 QFAETFNCPLGSPMNPKKKC 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl9NP_609815.1 GluZincin 62..>84 CDD:301352 9/31 (29%)
GluZincin <579..642 CDD:301352 19/74 (26%)
nep-3NP_494679.2 M13 82..631 CDD:189000 126/657 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.