DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13282 and Lipc

DIOPT Version :9

Sequence 1:NP_001260521.1 Gene:CG13282 / 35019 FlyBaseID:FBgn0032612 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:486 Identity:118/486 - (24%)
Similarity:191/486 - (39%) Gaps:136/486 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 PDVKYYIYTRHNPMDRQCLHIDES---------LEKSNLTDSYFNPRYPTKIIIHGYNSDMFL-- 128
            |::::.::.            |||         .....|.:..||..:|..:||||::.....  
  Rat    47 PEIRFLLFK------------DESDRLGCQLRPQHPETLQECGFNSSHPLVMIIHGWSGSESATV 99

  Fly   129 -------HPLQQMREEYLAK----------ADYNIIYVDWSILSPGPCYISAVHNTKHAGTCTAQ 176
                   ..:..:.|.::.|          ...|:..|||..|: ...|..||.||:..|...|.
  Rat   100 GKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNVGLVDWISLA-YQHYAIAVRNTRVVGQEVAA 163

  Fly   177 L---VERLVETGNTDIHVIGFSLGAQVPNYIARNL-SSFMLPRITGLDPAMPLFITSGKADKLDP 237
            |   :|..::...:.:|:||:||||.|..:...:: ....:.||||||||.|:|..:...::|.|
  Rat   164 LLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSSMGGKRKIGRITGLDPAGPMFEGTSPNERLSP 228

  Fly   238 SDASYVDVIHT-----NALVQGKMERCGHADFYMNGGIMQPGCNGQKI-------------NSFA 284
            .||::||.|||     ..|..|..:...|.|||.|||..||||:..::             .:..
  Rat   229 DDANFVDAIHTFTREHMGLSVGIKQPIAHYDFYPNGGSFQPGCHFLELYKHIAEHGLNAITQTIK 293

  Fly   285 CSHQRAPAYFLESIR-SPKGFWGWACSGYISYLLGMC-----PPTNFLLEAGENIR----PTTRG 339
            |:|:|:...|::|:: |.....|:.||...|:..|:|     ...|.|   |.:||    ..::.
  Rat   294 CAHERSVHLFIDSLQHSNLQNTGFQCSNMDSFSQGLCLNCKKGRCNSL---GYDIRRDRPRKSKT 355

  Fly   340 MFMIDTNDSSPFALGKWT-----------------DLPTLGAKQPQWRVPTQKLKAPPNQGVDPL 387
            :|:| |...|||.:..:.                 .:..||.|:...::|....:...:.....|
  Rat   356 LFLI-TRAQSPFKVYHYQFKIQFINQMEKPIEPTFTMTLLGTKEEIKKIPITLGEGITSNKTYSL 419

  Fly   388 LHHIDQ-FGKLA------------AN-FNNLQ---MWPTEQDPY-------EHWTSFSPEQKEND 428
            |..:|: .|:|.            || :|.:|   :|.||  |:       ..|......|:...
  Rat   420 LITLDKDIGELIMLKFKWENSAVWANVWNTVQTIMLWDTE--PHYAGLILKTIWVKAGETQQRMT 482

  Fly   429 SDGDSVEEQDPVEFIEPDDRQMISTEARPTQ 459
            ...|:|           ||.|:     .|||
  Rat   483 FCPDNV-----------DDLQL-----HPTQ 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13282NP_001260521.1 Lipase 67..351 CDD:278576 89/335 (27%)
Pancreat_lipase_like 75..347 CDD:238363 88/331 (27%)
LipcXP_006243421.1 Lipase 18..366 CDD:278576 89/335 (27%)
Pancreat_lipase_like 47..362 CDD:238363 88/331 (27%)
PLAT_LPL 369..504 CDD:238856 27/147 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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