DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cse1 and KAP120

DIOPT Version :9

Sequence 1:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_015200.1 Gene:KAP120 / 855978 SGDID:S000006046 Length:1032 Species:Saccharomyces cerevisiae


Alignment Length:1090 Identity:203/1090 - (18%)
Similarity:395/1090 - (36%) Gaps:240/1090 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 NVRRPAEKLLESTELQQNYPILL----LNLIDKAQMDMTTRVAGAIAFKNYIKRNWAAHLDSDGP 84
            :|::.||:.|...|.|..:..||    |||.:..|:    |....|.|||.:.:.|.    |...
Yeast    26 DVQKLAEQQLRQWETQAGFHYLLQSIYLNLSNSLQI----RWLAVIQFKNGVDKYWR----STRI 82

  Fly    85 DRIHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPKKWPQLI--------DEMVERF 141
            :.|.:.::.:|:..:..::......|..|.:.|.:.|.:.|||.:||.|.        ||::.:.
Yeast    83 NAIPKDEKASIRGRLFEMIDEQNNQLCIQNAQASARIARLDFPVEWPTLFEDLENLLNDEIIRKD 147

  Fly   142 ASGDFNVINGVLQTAHSL----FKRYRYEFKSQALWEEIKFVLDRMAKPLTDLLQATMQLTKVHE 202
            :...:|::..:.|....|    ..|.|     .|:..::..:|..:.:......:.....:.::.
Yeast   148 SVKIYNILMHINQIVKVLGTARIGRCR-----PAMQSKVPLILPLIVRIYLQSFEEWTTSSNLNY 207

  Fly   203 NNAGALKVIYGSLVLVNKV----------------FFSL----------NSQDLPEF--FEDNIN 239
            .:..:|:|.|.:|.::.::                |..|          |.::..:|  :|..|.
Yeast   208 EDLSSLQVSYLALKVLRRIICEGYDRPQTDQSVCDFIKLSVSHFEMLISNHENFKKFDIYEKFIK 272

  Fly   240 TWMGAFIQQLAADVPSLRTADDEDAGVLEHLRAQVCENICLYAKK-YDEEFKPFMEQF-VTA-VW 301
            . :|.....|....|:        ..:|.....|:   :..|.:. :|:..|.:.|.. ||. .|
Yeast   273 C-LGKLYFNLVTGSPA--------NFILLPCSTQI---LITYTRLIFDKAPKVYRENSDVTGDFW 325

  Fly   302 E-------LLVK---TSLHTKYDSLVSHALQFLSVVADRQHYQSIFENPEILAQICDKVVIPNLD 356
            |       |::|   ..:|.|....:......|::.|......:.|.|..::.::.|.::...|.
Yeast   326 EQTAIRGLLILKRVINFIHKKGAITLKARSDKLTIDASINKINTEFLNENLITRLVDTLMEWYLR 390

  Fly   357 IRPSDEEIFEDSPEEYIRRDIEGSDIDTRRRAACDLVKTLSINFEQKIFGIFGQYLERLLTKYKE 421
            :||::.|.:...|||:|...: .:..:.:.|...:       |..|.:...|.:.|...|.|..|
Yeast   391 LRPTELENWFMDPEEWINEQM-ATSYEYQIRPCAE-------NVFQDLMNTFSELLVPYLLKKIE 447

  Fly   422 NPAT-------NWRSKDTAIYLVTSWASRGGTQKHGITQTSELVPLPEFCAQQIIPELERPNI-- 477
            |.|:       ::..|| |||         .:.:...:..||:|.......|..:||....||  
Yeast   448 NDASKLSNSLDDFLRKD-AIY---------ASFQLSASAVSEMVDFDRLLIQVFLPEATNTNISG 502

  Fly   478 NEFPVLKAAAIKYVMVFRSI-LGPQVLASCLPQLIRHLPAESSVVHSYAACSVEKILSMRDASNA 541
            :|..:::......:..:.:: ...:..:.|.......|..|...|  ....:|:.:.:|.|..| 
Yeast   503 DELRIIRRRVALIINEWSTVKCSEESKSLCYKLFTNFLTDEDDKV--VLLTTVQTVRTMVDDWN- 564

  Fly   542 IVFGPQILAPYTTELISGLFATLSLPGSGENE---YVMKAIMRSFSVLQSAAMPFMGV------A 597
              |......|:.||.:..|...: ||.....|   ||:..:  |..::|:..:....:      .
Yeast   565 --FNKDTFQPFLTENVHLLLRKI-LPSVSLTETRLYVLNTL--SDIIIQTKPLISRDLLVEILQI 624

  Fly   598 LPRLTEILTQVAKN---------------PSRPQFNHYLFETLALCIKIVCHADSSAVSSFEEAL 647
            :|.|.||.|..|..               .|....:|..::.....:.:.|...|.......|..
Yeast   625 IPNLWEIATNNASEAILANALLRLLRNLVSSLGSQSHLTWDIAIPVVALACDPSSMQYQLLSEDG 689

  Fly   648 FPVFQGILQ----------QDIVEFMPYV-------FQMLSVLLEMREGTGTIPEPYWALFPCLL 695
            :.::..:||          ...||.:|::       .::|..|||:.:.           :..:|
Yeast   690 YELWGMLLQNFSSHDQEFDDKFVELVPFLKYGIETHTEILPTLLEIIKS-----------YALIL 743

  Fly   696 SPALWDRTGNVTPLIRLISAF---IKQGSAQIQALGKLSGILGIFQKMIASKANDHEGFYLLQNL 757
            :|..:........:.:.:|.:   :::.|.|:        :|.|::.:|.|..:|:|.. |||  
Yeast   744 NPVDFFSNNTFQDIFKQMSKYLLKLREDSFQL--------VLEIWEILILSNESDYENL-LLQ-- 797

  Fly   758 LSYYPPAEIQTNLRQIFGLLFQRLSLSKTP-KYLSGIII----------------FFSFY----V 801
             .:|...        :...||..:.|.:.| .||...||                |.:.|    .
Yeast   798 -KFYETG--------VLSALFDAIFLEEAPSSYLCSQIIQIIARISYVNPDALMTFLATYHDNLP 853

  Fly   802 IKFSGSQMAQLI------DEIQPNLFGMLLD-------RVFITEMGKIPKEQDRKMVAVGVTKLL 853
            .....::|.:.|      |:...::...||.       .:|..:..|:.......::..|:..:|
Yeast   854 TSNENARMPESIRKIVSKDQTYDSVVNKLLTGWIVCFRDIFDPKFKKVHILGISSLLRTGLVPIL 918

  Fly   854 TETPEILQQQYATFWPRLLHSLIDLFERPPEKLMGLEIGETAGVAEDPDAGYQVAFAQLTHAQPN 918
            ||...|     |:.|..:|..:.:......||....:|.....:|..|....|:.:.||  .:.|
Yeast   919 TEFSSI-----ASLWIEMLEEINETNRGDCEKYHLNDIVTEQSIAFHPLTAEQLRYHQL--CKNN 976

  Fly   919 QQDHLAEIKDARQFLATSLSKFAQARAG--EFSTLLSPLEPEYKQVLQKY 966
            ...|...:||   |::.|: ::.::..|  .:...|..:.|...:.||.:
Yeast   977 DPVHNISLKD---FISQSM-EYLESHLGVERYQEFLKTINPSLLENLQMF 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cse1NP_523588.2 IBN_N 29..105 CDD:281761 20/79 (25%)
Cse1 159..528 CDD:285678 73/423 (17%)
CAS_CSE1 530..966 CDD:281384 94/515 (18%)
KAP120NP_015200.1 CSE1 8..1023 CDD:227944 203/1090 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5657
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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