DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cse1 and CSE1

DIOPT Version :10

Sequence 1:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster
Sequence 2:NP_011276.1 Gene:CSE1 / 852612 SGDID:S000003207 Length:960 Species:Saccharomyces cerevisiae


Alignment Length:986 Identity:327/986 - (33%)
Similarity:531/986 - (53%) Gaps:54/986 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ANLQLLAGYLQQTLSADPNVRRPAEKLLESTELQQNYPILLLNLIDKAQMDMTTRVAGAIAFKNY 70
            ::|:.:|.:|.:::.|  :..:.:|:.|...|.|..:.:.||::|....:.::||:|||:.|||:
Yeast     2 SDLETVAKFLAESVIA--STAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNF 64

  Fly    71 IKRNWAAHLDSDGPDRIHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPKKWPQLID 135
            |||.|   :|.:|...:..::...||..||.||:..|..||.|:.:|:|.|...|||.:||.|:.
Yeast    65 IKRKW---VDENGNHLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLS 126

  Fly   136 EMVERFASGDFNVINGVLQTAHSLFKRYRYEFKSQALWEEIKFVLDRMAKPLTDLLQATMQLTKV 200
            ::..|.::.|.....|||..|||:|||:|..|:|..|:.|||.|||....|..:||:...:....
Yeast   127 DLASRLSNDDMVTNKGVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITA 191

  Fly   201 HENNAGALKVIYGSLVLVNKVFFSLNSQDLPEFFEDNINTWMGAFIQQLAADVPSLRTADD-EDA 264
            :|||..:|.:::..|:::.|:::..|.||:||||||||...||.|.:.|:...|.|...|: |.|
Yeast   192 NENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLSYSNPLLEDPDETEHA 256

  Fly   265 GVLEHLRAQVCENICLYAKKYDEEFKPFMEQFVTAVWELLVKTSLHTKYDSLVSHALQFLSVVAD 329
            .||..:::.:.|.:.||..:|::.|.|.:.:|:...|.||...|...|||.|||.:|.||:.|..
Yeast   257 SVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSISNQPKYDILVSKSLSFLTAVTR 321

  Fly   330 RQHYQSIFENPEILAQICDKVVIPNLDIRPSDEEIFEDSPEEYIRRDIEGSDIDTRRRAACDLVK 394
            ...|..||.|...:..|.:::::||:.:|..|.|:|||.|.||||||:||||.||||||..|.:|
Yeast   322 IPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLEGSDTDTRRRACTDFLK 386

  Fly   395 TLSINFEQKIFGIFGQYLERLLTKYKENPATNWRSKDTAIYLVTSWASRGGTQKHGITQTSELVP 459
            .|....|..:..||..:::..:.:|..:|:.||:.||..|||.|:.|..|.....|::.|:.|:.
Yeast   387 ELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLN 451

  Fly   460 LPEFCAQQIIPELERPNINEFPVLKAAAIKYVMVFRSILGPQVLASCLPQLIRHLPAESSVVHSY 524
            :.:|..::|.|:|...||... :|:..||||:..||:.|....|...:|.|...|..:..||::|
Yeast   452 VVDFFTKEIAPDLTSNNIPHI-ILRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTY 515

  Fly   525 AACSVEKILSMRDA--SNAIVFGPQILAPYTTELISGLFATLSLPGS-----GENEYVMKAIMRS 582
            ||.::||||::|::  |.|.:|..:.::..|..|:..|.|.:...||     .|||::|::|.|.
Yeast   516 AAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRV 580

  Fly   583 FSVLQSAAMPFMGVALPRLTEILTQVAKNPSRPQFNHYLFETLALCIKIVCHADSSAVSSFEEAL 647
            ....:.:..|.....|.:..||:|.:|||||.|:|.||.||::.   .|:.:.....:....:::
Yeast   581 LQTSEDSIQPLFPQLLAQFIEIVTIMAKNPSNPRFTHYTFESIG---AILNYTQRQNLPLLVDSM 642

  Fly   648 FPVFQGILQQDIVEFMPYVFQMLSVLLEMREGTGTIPEPYWALFPCLLSPALWDRTGNVTPLIRL 712
            .|.|..:..:||.||:|||||:::.::|.   :.||||....|...||:|.:|:..||:..:.||
Yeast   643 MPTFLTVFSEDIQEFIPYVFQIIAFVVEQ---SATIPESIKPLAQPLLAPNVWELKGNIPAVTRL 704

  Fly   713 ISAFIKQGSAQIQALGKLSGILGIFQKMIASKANDHEGFYLLQNLLSYYPPAEIQTNLRQIFGLL 777
            :.:|||..|:   ....|..:|||||::|||||.:..||.||::::.......::..::||..||
Yeast   705 LKSFIKTDSS---IFPDLVPVLGIFQRLIASKAYEVHGFDLLEHIMLLIDMNRLRPYIKQIAVLL 766

  Fly   778 FQRLSLSKTPKYLSGIIIFFSFYVIKFSGSQMAQLIDEIQPNLFGMLLDRVFITEMGKIPKEQDR 842
            .|||..|||.:|:..:.:||.....|.....:...|||:|..||..:.....||.:..|....||
Yeast   767 LQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLPTIGNLLDR 831

  Fly   843 KMVAVGVTKLLTETPEILQQQYATFWPRLLHSLIDLFERPPEKLMGLEIGETAGVAE------DP 901
            |:..:||..::. ..:..|.:|.|.....::|:|             |...:..:|.      |.
Yeast   832 KIALIGVLNMVI-NGQFFQSKYPTLISSTMNSII-------------ETASSQSIANLKNDYVDL 882

  Fly   902 DAGYQVA-----FAQLTHAQPNQQDHLAEI---KDARQFLATSLSKFAQARAGEFSTLLSPLEPE 958
            |...:::     |::|........|.|.||   ...|.::|.:|:|: .|.:|  :|.|:.:.|:
Yeast   883 DNLEEISTFGSHFSKLVSISEKPFDPLPEIDVNNGVRLYVAEALNKY-NAISG--NTFLNTILPQ 944

  Fly   959 YKQVLQKYCDQ 969
            ..|..|...:|
Yeast   945 LTQENQVKLNQ 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cse1NP_523588.2 IBN_N 29..105 CDD:397745 27/75 (36%)
Cse1 159..529 CDD:430038 139/370 (38%)
CAS_CSE1 530..966 CDD:367469 135/456 (30%)
CSE1NP_011276.1 CSE1 1..960 CDD:227944 327/986 (33%)

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