DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cse1 and ipo11

DIOPT Version :9

Sequence 1:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster
Sequence 2:XP_005167213.1 Gene:ipo11 / 432373 ZFINID:ZDB-GENE-040711-1 Length:975 Species:Danio rerio


Alignment Length:1081 Identity:209/1081 - (19%)
Similarity:407/1081 - (37%) Gaps:225/1081 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEVTEANLQLLAGYLQQTLSADPNVRRPAEKLLESTELQQNYPILLLNLIDKAQMDMTTRVAGAI 65
            |::..|:..:|.. |.|..|.|..|.:|||:.|...|.|..:..:||::.:...:|:..|....:
Zfish     1 MDIQSASSVVLQA-LTQATSQDTAVLKPAEEQLRQWETQPGFYSVLLSIFNNHLLDVNVRWLAVL 64

  Fly    66 AFKNYIKRNWAAHLDSDGPDRIHESDRNTIKTLIVTLMLHSPV-ALQKQLSDAVSIIGKYDFPKK 129
            .|||.|.|.|.    ...|..:.|.::::::..::| ..:.|| .:..|::..::.:.:.|.|::
Zfish    65 YFKNGIDRYWR----RVAPHALSEEEKSSLRAGLIT-NFNEPVNQIATQIAVLIAKVARLDCPRQ 124

  Fly   130 WPQLIDEMVERFASGDF------------------------------NVINGVLQTAHSLFKRYR 164
            ||:||..::|.....|.                              ::.:.:...|.||:..:.
Zfish   125 WPELIPILLESVKVQDSLQQHRALLTFYHVTKTLASKRLATDRRLFQDLASSIYSFACSLWNHHT 189

  Fly   165 YEFKSQALWEEIKFVLDRMAKPLTDLLQATMQLTKVH-----ENN---AGALKVIY--------- 212
            ..|..|....:.:..|..:.:.|.. |:...:|| ||     :||   .|.|..::         
Zfish   190 DSFLQQIYSGDQQTALSSLERTLLS-LKVLRKLT-VHGFVDPQNNMEVMGFLNAVFERLKQFLEC 252

  Fly   213 ------GS---------LVLVNKVFFSLNSQDLPEFFEDNINTWMGAFIQQLAADVPSLRTADDE 262
                  ||         ::|..||        |.:|.|.:...::....:.|...|..:.|...|
Zfish   253 CRQVGPGSPCREKLEKTIILFTKV--------LLDFLEYHPCPFIPLIQRSLEFAVSYVFTEAGE 309

  Fly   263 DAGVLEHLRAQVCENICLYAKKYDEEFKPFMEQFVTAVWELLVKTSLHTKYDSLVSHALQFLSVV 327
            .. |.|....| |.|:.....|.| .:||             .|....:|.:||.:|.:      
Zfish   310 GV-VFERFIVQ-CMNLIKMIVKND-AYKP-------------AKNIEDSKPESLEAHRI------ 352

  Fly   328 ADRQHYQSIFENPEILAQICDKVVIPNLDIRPSDEEIFEDSPEEYIRRDIEGSDIDTRRRAACDL 392
                  ::.|...:.|.:|..::|.....:...:..::|:.||.:...:..|.......|.:.: 
Zfish   353 ------KTAFFTHQTLTEIGRRLVSKYFLLTEEELTMWEEDPESFAVEETGGDSWKYSLRPSTE- 410

  Fly   393 VKTLSI--NFEQKIFGIFGQYLERLLTKYKENPATNWRSKDTAIYLVTSWASRGGTQKHGITQTS 455
            |..|.|  |:.|.:..:..:.::.|..............|| |:|.....|:         .:..
Zfish   411 VLFLDIFHNYSQTLTPVLLEMVQNLQGPSNVEDPVQMLMKD-AVYNAVGLAA---------YELF 465

  Fly   456 ELVPLPEFCAQQIIPELERPNINEFPVLKAAAIKYVMVFRSILGPQVLASCLPQLIRHLPAESSV 520
            :.|...::...|::.||:..: |.:.:::...|..:..:.|:.....|...|.::|..|..:..:
Zfish   466 DNVDFDQWFKNQLLGELQVSH-NRYKLIRRRVIWLIGQWISVKFKPELRPLLYEVILSLMQDPDL 529

  Fly   521 VHSYAACSVEKILSMRDASNAIVFGPQILAPYTTELISGLFATLSLPGSGENE----YVMKAIMR 581
            |     ..:|...:::.|.:...|..:...||...:.|.||..|......:.:    :|:..::.
Zfish   530 V-----VRIETATTLKLAVDDFEFRTEQFLPYLESIFSLLFQLLQQVNECDTKMQVLHVISCVIE 589

  Fly   582 SFSVLQSAAMPFMGVALPRLTEILTQVAKNPSRPQFNHYLFETLALCIKIV--CHADSSAVSSFE 644
            ..|:   ...|::|..:..|..:..|      ..:.|......|...|.:|  ..|:|..:..| 
Zfish   590 RVSI---QIRPYVGCLVQYLPLLWKQ------SEEHNMLRCAILTTLIHLVQGLGAESKNLYPF- 644

  Fly   645 EALFPVFQGILQQDIVEFMPYVFQM---LSVLLEMREGTGTIPEPYWALFPCLLSPALWDRTGNV 706
              |.||.|  |..|:.: .|:|:.:   |.:.|...|.:..|......:|. .:||.|...:.||
Zfish   645 --LLPVIQ--LSTDVSQ-PPHVYLLEDGLELWLVTLENSPAITPELLRIFQ-NMSPLLELSSENV 703

  Fly   707 TPLIRLISAFIKQGSAQI-----QALGKLSGILGIFQKMIASKANDHEGFYLLQNLLSYYPPAEI 766
            ....::|:|:|...:...     :||.:      .|.::::...|:.:        :......||
Zfish   704 RTCFQIINAYIYLSATDFLQNYAEALCR------SFCELLSDITNEGQ--------VQVLKVVEI 754

  Fly   767 QTNLRQIFGL-LFQRLSLSKTPKYLSGII------IFFSFY-------VIKFSG------SQMAQ 811
            ...:..|.|. :||.|    .|..:.||:      :..|.|       :::.||      :|||.
Zfish   755 AIKVSPILGSHMFQPL----LPSVIRGIVEGERYPVVMSTYLGVTGRILLQNSGFFTSLLTQMAV 815

  Fly   812 LIDEIQPNLFGMLLDRVFITEMGKIPKEQDRKMVAVGVTKLLTETPEILQQQYATFWPRLLHSLI 876
            ..::....|.|.::: :::..|..|.:.:.||:.|:.:..||.....::|.::.......:.:|.
Zfish   816 EFNQEADQLLGSMIE-MWVDRMDNITQPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEALH 879

  Fly   877 DLFERPPE-----KLMGLEIGETAGVAEDPDAGYQVAFAQLTHAQPNQQD---HLAEIKD----- 928
            |:....||     ..|.:...|...:.:|.:             .|.:||   .|..::|     
Zfish   880 DVMTEDPETATFKDCMLMSHFEEPKLTDDEE-------------PPTEQDKRRKLLALEDPVHSV 931

  Fly   929 -ARQFLATSLSKFAQARAGE--FSTLLSPLEPEYKQVLQKY 966
             .:||:...| |..|...|:  |..|:..::.|..:.||::
Zfish   932 SLQQFVYEKL-KAQQMLMGDQGFQALMETVDTEIVRQLQEF 971

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cse1NP_523588.2 IBN_N 29..105 CDD:281761 18/75 (24%)
Cse1 159..528 CDD:285678 72/402 (18%)
CAS_CSE1 530..966 CDD:281384 97/485 (20%)
ipo11XP_005167213.1 CSE1 10..>760 CDD:227944 159/840 (19%)
IBN_N 28..100 CDD:281761 18/76 (24%)
HEAT repeat 515..545 CDD:293787 6/34 (18%)
HEAT repeat 559..586 CDD:293787 5/26 (19%)
HEAT repeat 599..630 CDD:293787 6/36 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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