DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13280 and AT1G34200

DIOPT Version :9

Sequence 1:NP_609812.1 Gene:CG13280 / 35015 FlyBaseID:FBgn0032609 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_564441.1 Gene:AT1G34200 / 840319 AraportID:AT1G34200 Length:352 Species:Arabidopsis thaliana


Alignment Length:348 Identity:83/348 - (23%)
Similarity:138/348 - (39%) Gaps:39/348 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 LRWGIAPVSLMADDFAAALSVLPEQHHRIVSCVAAYQS--HALAFAERHQV---ENVYTSFEDLA 151
            :|.|:...:......:.|:::.|   :..:|.:|...|  .|.:||:.:..   ..:::|:|.|.
plant     7 IRIGLLSCTNKVRKLSRAINLSP---NATISAIATTSSIEEAKSFAKSNNFPPNTKLHSSYESLL 68

  Fly   152 KCPNVDVVYISPLNPQHSELCHLMLNHDKHVLCEKPLCMTEEQVTKLLEKARARGLFLMEG-MW- 214
            :.|:||.||.......|.|...|.....||:|.:||:.:...:..:::|.....|:..|:| .| 
plant    69 EDPDVDAVYFPIPTRLHVEWATLAAIKGKHILLDKPVALNVAEFDQIVEACEVNGVQFMDGTQWM 133

  Fly   215 --PRCVPAYHYLRHQILRNRLGEIKQVHCTLGLPVSQGRL--------GLYG-GVTNDFGVYGMQ 268
              ||......::..   ....|:||.|:.......|...|        ||.| |...|.|.|.:|
plant   134 HSPRTDKIKEFVND---LESFGQIKSVYSCFSFAASDDFLKHDIRVKPGLDGLGALGDAGWYTIQ 195

  Fly   269 LALWV--FREVPRCLKVSGRV-NSEHVDVSADIELCFTRGKRALIEVSSEKKLSNQAVIQGKDGS 330
            ..|.|  |:.......:||.| |...:.:|......:..|..|.|..|....|:.:....|..||
plant   196 AILLVNNFKLPKTVTALSGSVLNDAGIVLSCGALFDWEDGVNATIYCSFLANLTMEITAIGTKGS 260

  Fly   331 IKMNNYWCPTRLITEEVDYEFPLPGGDQLPPTHYHNRLGM--CYEAE------EVRNCILKGSTE 387
            ::::::..| .:.||.|   |...||..:........|..  |...|      |::|...|....
plant   261 LRVHDFVIP-YMETEAV---FTTSGGGCVSEHKVMTELSQEACMVMEFARLVGEIKNRGAKPDGF 321

  Fly   388 SDDFSHNESLLLANLMDTIHAEL 410
            ...||.|..||:..:.::|...|
plant   322 WMRFSRNTQLLVDAVKESIDNNL 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13280NP_609812.1 MviM 89..387 CDD:223745 76/323 (24%)
GFO_IDH_MocA 92..213 CDD:279716 30/126 (24%)
AT1G34200NP_564441.1 MviM 6..342 CDD:223745 82/344 (24%)
GFO_IDH_MocA 7..127 CDD:279716 28/122 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 70 1.000 Domainoid score I3394
eggNOG 1 0.900 - - E1_COG0673
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 100 1.000 Inparanoid score I2178
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D943656at2759
OrthoFinder 1 1.000 - - FOG0001373
OrthoInspector 1 1.000 - - mtm1036
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X868
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.870

Return to query results.
Submit another query.