DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17928 and FADS2

DIOPT Version :9

Sequence 1:NP_001260515.1 Gene:CG17928 / 35009 FlyBaseID:FBgn0032603 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_004256.1 Gene:FADS2 / 9415 HGNCID:3575 Length:444 Species:Homo sapiens


Alignment Length:432 Identity:90/432 - (20%)
Similarity:163/432 - (37%) Gaps:87/432 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QHRPITSESWLEGKNVDDEAEGLWRINDTLYDLSDFAARHPGGSSWIECTRGTDITEPFESHHIE 89
            |...:.::.||.             |:..:|:::.::.:||||...|....|.|.|:.|.:.|.:
Human    27 QKHNLRTDRWLV-------------IDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPD 78

  Fly    90 ERARGMLSKFEVRKAARP--------RNYKFTLEENGFYMTLKRRVREKLRKIDYSPTKKTEFL- 145
            ....|...|..:.....|        :|.|.|.:        .|.:|:....::...|....|| 
Human    79 LEFVGKFLKPLLIGELAPEEPSQDHGKNSKITED--------FRALRKTAEDMNLFKTNHVFFLL 135

  Fly   146 ---HLGILVSVFLFS-------WAGTVLDSLIF---KGLAGLALCWVATSTHNYFH----QRDSW 193
               |:..|.|:..|:       |..|::.:.:.   :..||    |:   .|:|.|    ::..|
Human   136 LLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAG----WL---QHDYGHLSVYRKPKW 193

  Fly   194 RMYTFNLTMMNFR----NWRISHALSHHVYANSLH-DLEMSMFEPFLC--WIPDSHYASKPQRLI 251
            ........:.:.:    ||.......||...|..| |.:::|...|:.  |.| ..|..|..:.:
Human   194 NHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHVFVLGEWQP-IEYGKKKLKYL 257

  Fly   252 S---------VVISPVVYVVLFQGQFLIRLVLSLTKRNVLCWDDL---IGFSLPIFIYLSTGVSL 304
            .         ::..|::..:.||.|.::.:::   .:|   |.||   :.:.:..||.......:
Human   258 PYNHQHEYFFLIGPPLLIPMYFQYQIIMTMIV---HKN---WVDLAWAVSYYIRFFITYIPFYGI 316

  Fly   305 LSALLSWEIIISVGSFIFGLVGLTAAHHDPRILHDGDAQRQDFDWGLYQVDTIIDRGDIKWSDLL 369
            |.|||....|..:.|..|  |.:|..:|....: |.:|.|   ||...|:....:.....::|..
Human   317 LGALLFLNFIRFLESHWF--VWVTQMNHIVMEI-DQEAYR---DWFSSQLTATCNVEQSFFNDWF 375

  Fly   370 VLTHFGEHALHHLFPTLDHGVLKHLYPELRKTMKEFDVELRE 411
             ..|......||||||:....|..:.|.::....:..:|.:|
Human   376 -SGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQE 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17928NP_001260515.1 Cyt-b5 33..103 CDD:278597 16/69 (23%)
Membrane-FADS-like 151..388 CDD:294412 58/269 (22%)
FA_desaturase 171..412 CDD:278890 58/264 (22%)
FADS2NP_004256.1 CYB5 1..432 CDD:332558 90/432 (21%)
Delta6-FADS-like 162..412 CDD:239583 56/270 (21%)
Histidine box-1 180..184 2/3 (67%)
Histidine box-2 217..221 0/3 (0%)
Histidine box-3 382..386 0/3 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 45 1.000 Inparanoid score I5495
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1060606at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.870

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