Protein Alignment CG17928 and Fads1

DIOPT Version :9

• Sequence 1: NP_001260515.1
• Gene: CG17928 / 35009
• FlyBaseID: FBgn0032603
• Length: 441
• Species: Drosophila melanogaster
• Sequence 2: XP_006231137.1
• Gene: Fads1 / 84575
• RGDID: 621678
• Length: 471
• Species: Rattus norvegicus
• Alignment Length: 448
• Identity: 99/448 - (22%)
• Similarity: 159/448 - (35%)
• Gaps: 108/448 - (24%)

  Fly    21 PSYRQHRPITSESWLEGKNVDDEAEGLWRIND-TLYDLSDFAARHPGGSSWIECTRGTDITEPFE 84
            |:..|.|.:...:|.|........:..|.:.| .:|::|||:.||||||..|....|.|.|:||.
  Rat    11 PASAQLRQMRYFTWEEVAQRSGREKERWLVIDRKVYNISDFSRRHPGGSRVISHYAGQDATDPFV 75

  Fly    85 SHHIEERARGMLSK----------------FEVRKAARPRNYKFTLEENGFYMTLK--------- 124
            :.||.   :|::.|                ||..|...|....|    .|:..|.|
  Rat    76 AFHIN---KGLVRKYMNSLLIGELAPEQPSFEPTKNLPPWEVLF----KGWGATEKNSSPCLPQK 133

  Fly   125 ------RRVREKLRKIDYSPTKKTEF----LHLGIL-VSVFLFSWA-GTVLDSLIFKGLAGLALC 177
                  |.:|..:.::.........|    ||:.:| |:.:|..|. ||        .|....||
  Rat   134 ALTDEFRELRATVERMGLMKANHLFFLFYLLHILLLDVAAWLTLWIFGT--------SLVPFTLC 190

  Fly   178 WVATST---------HNYFH----QRDSWRMYTFNLTMMNFRN-----WRISHALSHHVYANSLH 224
            .|..||         |::.|    ...:|.....:..:.:.:.     |...| ..||...|...
  Rat   191 AVLLSTVQAQAGWLQHDFGHLSVFSTSTWNHLVHHFVIGHLKGAPASWWNHMH-FQHHAKPNCFR 254

  Fly   225 -DLEMSMFEPFLC---------------WIPDSHYASKPQRLISVVISPVVYVVLFQGQFLIRLV 273
             |.:::|...|..               .:|.:|     |.....:|.|...:.|:...::...|
  Rat   255 KDPDINMHPLFFALGKVLSVELGKEKKKHMPYNH-----QHKYFFLIGPPALLPLYFQWYIFYFV 314

  Fly   274 LSLTKRNVLCWDDLIGFSLPIFIYLSTGVSLLSALLSWEIIISVGSFIFGLVGLTAAHHDP-RIL 337
            :...|...|.|  ::.|.:.:|......:.|...|..:.|:..:.|..|  |.:|..:|.| .|.
  Rat   315 VQRKKWVDLAW--MLSFYVRVFFTYMPLLGLKGLLCLFFIVRFLESNWF--VWVTQMNHIPMHID 375

  Fly   338 HDGDAQRQDFDWGLYQVDTIIDRGDIKWSDLLVLTHFGEHALHHLFPTLDHGVLKHLY 395
            ||     ::.||...|:....:.....:::.. ..|......||||||:.    :|.|
  Rat   376 HD-----RNVDWVSTQLQATCNVHQSAFNNWF-SGHLNFQIEHHLFPTMP----RHNY 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG17928	NP_001260515.1	Cyt-b5	33..103	CDD:278597	26/86 (30%)
		Membrane-FADS-like	151..388	CDD:294412	56/272 (21%)
		FA_desaturase	171..412	CDD:278890	53/260 (20%)
Fads1	XP_006231137.1	PLN03199	12..466	CDD:178740	98/447 (22%)
		Cyt-b5	21..96	CDD:278597	24/77 (31%)
		Delta6-FADS-like	189..439	CDD:239583	52/255 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG3239
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	56	1.000	Inparanoid score	I5335
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1060606at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	5	4.870