DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17928 and FADS1

DIOPT Version :9

Sequence 1:NP_001260515.1 Gene:CG17928 / 35009 FlyBaseID:FBgn0032603 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_037534.5 Gene:FADS1 / 3992 HGNCID:3574 Length:501 Species:Homo sapiens


Alignment Length:439 Identity:99/439 - (22%)
Similarity:170/439 - (38%) Gaps:118/439 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PITSESWLEGKNV-----DDEA-----EGLWRIND-TLYDLSDFAARHPGGSSWIECTRGTDITE 81
            |:.:|:..:|...     |:.|     |..|.:.| .:|::|:|..||||||..|....|.|.|:
Human    62 PVAAETAAQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATD 126

  Fly    82 PFESHHIEERARGMLSKFEVRKAARPRNY----KFTLEENGFYMTLKRRVREKLRKIDYSPTKKT 142
            ||.:.||.   :|::.|:        .|.    :.:.|:..|..|..:.:.::.|::      :.
Human   127 PFVAFHIN---KGLVKKY--------MNSLLIGELSPEQPSFEPTKNKELTDEFREL------RA 174

  Fly   143 EFLHLGILVS--VFLFSWAGTVLDSLIFKGLAGLALCWVATSTHNYF----------HQRDSWRM 195
            ....:|::.:  ||...:   :|..|:..|.|.|.| ||..::...|          ..:..|..
Human   175 TVERMGLMKANHVFFLLY---LLHILLLDGAAWLTL-WVFGTSFLPFLLCAVLLSAVQAQAGWLQ 235

  Fly   196 YTF-NLTMMNFRNWRISHALSHHV----------YANSLH------------DLEMSMFEPFLC- 236
            :.| :|::.:...|  :|.|.|.|          :.|.:|            |.:::| .||.. 
Human   236 HDFGHLSVFSTSKW--NHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRKDPDINM-HPFFFA 297

  Fly   237 ---------------WIPDSHYASKPQRLISVVISPVVYVVLFQGQFLIRLVLSLTKRNVLCWDD 286
                           ::|.:|     |.....:|.|...:.|:...::...|:...|...|.|  
Human   298 LGKILSVELGKQKKKYMPYNH-----QHKYFFLIGPPALLPLYFQWYIFYFVIQRKKWVDLAW-- 355

  Fly   287 LIGFSLPIFIYLSTGVSL--LSALLSWEIIISVGSFIFG--LVGLTAAHHDP-RILHDGDAQRQD 346
            :|.|.:..|:   |.|.|  |.|.|....|:   .|:..  .|.:|..:|.| .|.||     ::
Human   356 MITFYVRFFL---TYVPLLGLKAFLGLFFIV---RFLESNWFVWVTQMNHIPMHIDHD-----RN 409

  Fly   347 FDWGLYQVDTIIDRGDIKWSDLLVLTHFGEHALHHLFPTLDHGVLKHLY 395
            .||...|:....:.....::|.. ..|......||||||:.    :|.|
Human   410 MDWVSTQLQATCNVHKSAFNDWF-SGHLNFQIEHHLFPTMP----RHNY 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17928NP_001260515.1 Cyt-b5 33..103 CDD:278597 25/80 (31%)
Membrane-FADS-like 151..388 CDD:294412 64/292 (22%)
FA_desaturase 171..412 CDD:278890 61/279 (22%)
FADS1NP_037534.5 PRK07003 <3..>75 CDD:235906 3/12 (25%)
PLN03199 74..496 CDD:178740 96/427 (22%)
Delta6-FADS-like 218..469 CDD:239583 55/262 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 45 1.000 Inparanoid score I5495
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1060606at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.870

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