DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17928 and Cyt-b5-r

DIOPT Version :9

Sequence 1:NP_001260515.1 Gene:CG17928 / 35009 FlyBaseID:FBgn0032603 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001260514.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster


Alignment Length:432 Identity:240/432 - (55%)
Similarity:301/432 - (69%) Gaps:2/432 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DWRVSGISRNYPSYRQHRPITSESWLEGKNVDDEAEGLWRINDTLYDLSDFAARHPGGSSWIECT 74
            :|:.|||:..:|:||....||:.||.:||..||.|||||||||.:||.:.|..:||||..||..|
  Fly     5 EWKKSGIATKFPTYRNSALITTHSWQKGKRQDDGAEGLWRINDGIYDFTSFIDKHPGGPFWIRET 69

  Fly    75 RGTDITEPFESHHIEERARGMLSKFEVRKAARPRNYKFTLEENGFYMTLKRRVREKLRKIDYSPT 139
            :||||||.||:||:......|::|::||.||.||.|..||||.|||.|||.||||:|:.||..|.
  Fly    70 KGTDITEAFEAHHLTTAPEKMIAKYKVRDAAEPRIYTLTLEEGGFYKTLKERVREQLKTIDKRPK 134

  Fly   140 KKTEFLHLGILVSVFLFSWAGTVLDSLIFKGLAGLALCWVATSTHNYFHQRDSWRMYTFNLTMMN 204
            ||::.:|||::||::|...|....:||:...||.:||||....:|||||:||:|:||.|||.|||
  Fly   135 KKSDLIHLGLVVSLYLLGIASAKYNSLLALVLASVALCWTVIVSHNYFHRRDNWQMYAFNLGMMN 199

  Fly   205 FRNWRISHALSHHVYANSLHDLEMSMFEPFLCWIPDSHYASKPQRLISVVISPVVYVVLFQGQFL 269
            |..||:|||||||:|.||..|||:|||||.|||:|:.|..||..|.:|.|..||.|.:.|..|..
  Fly   200 FAAWRVSHALSHHIYPNSYFDLELSMFEPLLCWVPNPHIKSKLMRYVSWVTEPVAYALAFFIQMG 264

  Fly   270 IRLVLSLTKRNVLCWDDLIGFSLPIFIYLSTGVSL--LSALLSWEIIISVGSFIFGLVGLTAAHH 332
            .|:..||...|:|.|.||:..::||.|||.||.||  ...:..|..:.|:.||.|.|:||.||||
  Fly   265 TRIFYSLRHTNILYWHDLLPLTIPIAIYLGTGGSLGIWICVRQWLAMTSIASFSFCLIGLNAAHH 329

  Fly   333 DPRILHDGDAQRQDFDWGLYQVDTIIDRGDIKWSDLLVLTHFGEHALHHLFPTLDHGVLKHLYPE 397
            ||.|.|:|||.|:|.||||:||||||||||:|||..|||||||:|.|||||||||||:|..|||.
  Fly   330 DPEIYHEGDANREDRDWGLFQVDTIIDRGDLKWSQFLVLTHFGDHVLHHLFPTLDHGLLPALYPV 394

  Fly   398 LRKTMKEFDVELREINHWSHIKGQNQQLLRTEKNPIPPGSKK 439
            |.:|:.||...|||.||..|:.||::||||.|.||..||:.|
  Fly   395 LYQTLDEFKGHLRECNHIEHMIGQHKQLLRIEPNPRAPGAGK 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17928NP_001260515.1 Cyt-b5 33..103 CDD:278597 38/69 (55%)
Membrane-FADS-like 151..388 CDD:294412 135/238 (57%)
FA_desaturase 171..412 CDD:278890 142/242 (59%)
Cyt-b5-rNP_001260514.1 Cyt-b5 26..98 CDD:278597 38/71 (54%)
FA_desaturase 161..408 CDD:278890 142/246 (58%)
Membrane-FADS-like <328..385 CDD:294412 44/56 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456655
Domainoid 1 1.000 260 1.000 Domainoid score I4578
eggNOG 1 0.900 - - E1_COG3239
Homologene 1 1.000 - - H43205
Inparanoid 1 1.050 45 1.000 Inparanoid score I2674
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58866
OrthoDB 1 1.010 - - D1060606at2759
OrthoFinder 1 1.000 - - FOG0012745
OrthoInspector 1 1.000 - - mtm9664
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR16740
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11811
1211.910

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