DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17928 and fat-2

DIOPT Version :9

Sequence 1:NP_001260515.1 Gene:CG17928 / 35009 FlyBaseID:FBgn0032603 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_502560.1 Gene:fat-2 / 178293 WormBaseID:WBGene00001394 Length:376 Species:Caenorhabditis elegans


Alignment Length:342 Identity:75/342 - (21%)
Similarity:123/342 - (35%) Gaps:93/342 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 VREKLRKIDYSPTKKTEFLHLGILVSV----FLFSWAGTVLDSLIFKGLAGLALCWVATSTHNYF 187
            |::.|..|.|  ..|...|..|:..:|    ....|.| :|......|:.|.||..|.   |:..
 Worm    38 VKDPLTSISY--LIKDYVLLAGLYFAVPYIEHYLGWIG-LLGWYWAMGIVGSALFCVG---HDCG 96

  Fly   188 HQRDSWRMYTFNL--------TMMNFRNWRISHALSHHVYANSLHDLEMSMFEPFLCWIPDSHYA 244
            |...|...:..:|        .:..|..|:.||. .||.|.:   .:|.....|   |:.:..|.
 Worm    97 HGSFSDYEWLNDLCGHLAHAPILAPFWPWQKSHR-QHHQYTS---HVEKDKGHP---WVTEEDYN 154

  Fly   245 SKP--QRLISVV-IS------PVVYVV-------------LFQGQFLIRLVLSLTKRNVLCWDDL 287
            ::.  ::..:|: ||      |:..:|             ||:          .|:..|.|  .:
 Worm   155 NRTAIEKYFAVIPISGWLRWNPIYTIVGLPDGSHFWPWSRLFE----------TTEDRVKC--AV 207

  Fly   288 IGFSLPIFIYLS---TGVSLLSALLSWEIIISVGSFIFGLVGLTAAHHDPRILHDGDAQRQDF-- 347
            .|.:..|..|::   ...|:.:.:..:.|.:.....|  ||.:|...|          |.:|.  
 Worm   208 SGVACAICAYIAFVLCDYSVYTFVKYYYIPLLFQGLI--LVIITYLQH----------QNEDIEV 260

  Fly   348 ----DWGLYQVDT-IIDRGDIKWS---DLLVLTHFGEHALHHLFPT-LDHGVLKHLYPELRKTMK 403
                :||..:..| .|||   .|.   |.::......|..||.|.| :.|..|....|.::|.::
 Worm   261 YEADEWGFVRGQTQTIDR---HWGFGLDNIMHNITNGHVAHHFFFTKIPHYHLLEATPAIKKALE 322

  Fly   404 EF-DVEL---REINH-W 415
            .. |.:.   ||:|: |
 Worm   323 PLKDTQYGYKREVNYNW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17928NP_001260515.1 Cyt-b5 33..103 CDD:278597
Membrane-FADS-like 151..388 CDD:294412 59/284 (21%)
FA_desaturase 171..412 CDD:278890 60/288 (21%)
fat-2NP_502560.1 Delta12-FADS-like 39..310 CDD:239584 66/310 (21%)
FA_desaturase 70..323 CDD:278890 62/290 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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