DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17928 and fads2

DIOPT Version :10

Sequence 1:NP_609810.1 Gene:CG17928 / 35009 FlyBaseID:FBgn0032603 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_012816067.1 Gene:fads2 / 100145314 XenbaseID:XB-GENE-1010230 Length:446 Species:Xenopus tropicalis


Alignment Length:453 Identity:95/453 - (20%)
Similarity:162/453 - (35%) Gaps:112/453 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 TSESWLEGKNVDDEAEGLWR--------------INDTLYDLSDFAARHPGGSSWIECTRGTDIT 80
            :.|....|..|..||...|.              |...:|:::.:...||||...|....|.|.|
 Frog     7 SGEGCSSGNCVKPEARYSWEEIQKHNLKTDKWLVIERKVYNITQWVKCHPGGMRVIGHYAGEDAT 71

  Fly    81 EPFESHHIEERARGMLSKFEVRKAARPRNYKFTLEENGFYMTLKRRVREKLRKIDYSPTKKTEFL 145
            :.|.:.|.:        |..|||..:|. |...|.||   ...:.|.:...:..|:...:||. .
 Frog    72 DAFHAFHPD--------KNFVRKFLKPL-YVGELAEN---EPSQDRDKNAQQVEDFRALRKTA-E 123

  Fly   146 HLGILVS------VFLF------------------SWAGTVLDSL---IFKGLAGLALCWVATST 183
            .:|:..|      |:||                  .|..|:|..|   |.:..||    |:   .
 Frog   124 DMGLFKSNPAFFIVYLFHILLIEFLAWCTLHYFGTGWIPTILTVLLLTISQAQAG----WL---Q 181

  Fly   184 HNYFH----QRDSWRMYTFNLTMMNFR----NWRISHALSHHVYANSLH-DLEMSMFEPFLC--- 236
            |::.|    ::..|........:.:.:    ||.......||...|... |.:::|...|:.   
 Frog   182 HDFGHLSVFKKSKWNHLIHKFIIGHLKGASANWWNHRHFQHHAKPNIFRKDPDVNMVNVFVLGDT 246

  Fly   237 -----------WIPDSHYASKPQRLISVVISPVVYVVLFQGQFLIRLVLSLTKRNVLCWDDL--- 287
                       ::|.:|     |.|...:|.|.:.:.::   |.|:::.::..|.  .|.||   
 Frog   247 QPVEFGKKRIKYLPYNH-----QHLYFFLIGPPLLIPIY---FTIQIMKTMITRK--DWVDLAWS 301

  Fly   288 IGFSLPIFIYLSTGVSLLSALLSWEIIISVGSFIFGLVGLTAAHHDPRILHDGDAQRQDFDWGLY 352
            :.:....||.......:|.:|.....:..:.|..|  |.:|..:|.|.::   |.::.. ||...
 Frog   302 VSYYARFFITFVPFYGVLGSLALLNAVRFIESHWF--VWVTQMNHLPMVI---DHEKYK-DWLET 360

  Fly   353 QVDTIIDRGDIKWSDLLVLTHFGEHALHHLFPTLDHGVLKHLY----PELRKTMKEFDVELRE 411
            |:....:.....::|.. ..|......||||||:.    :|.|    |.:|....:::|...|
 Frog   361 QLAATCNIEPSFFNDWF-SGHLNFQIEHHLFPTMP----RHNYWKIAPLVRSLCSKYNVTYEE 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17928NP_609810.1 Cyt-b5 42..105 CDD:459698 19/76 (25%)
DesA 111..427 CDD:442471 71/358 (20%)
fads2XP_012816067.1 PLN03199 1..434 CDD:178740 95/453 (21%)
Delta6-FADS-like 164..414 CDD:239583 55/277 (20%)

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