DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-b5-r and FADS1

DIOPT Version :9

Sequence 1:NP_001260514.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_037534.5 Gene:FADS1 / 3992 HGNCID:3574 Length:501 Species:Homo sapiens


Alignment Length:472 Identity:103/472 - (21%)
Similarity:176/472 - (37%) Gaps:107/472 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ATKFPTYRNSALITTHSWQKGKRQDDGAEGLWRIND-GIYDFTSFIDKHPGGPFWIRETKGTDIT 75
            |.:.||.|      ..:|.: ..|..|.|..|.:.| .:|:.:.|..:||||...|....|.|.|
Human    68 AAQGPTPR------YFTWDE-VAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDAT 125

  Fly    76 EAFEAHHLTTAPEKMIAKYKVRDAAEPRIYTLTLEEGGF----YKTLKERVREQLKTIDKRPKKK 136
            :.|.|.|:.   :.::.||    .....|..|:.|:..|    .|.|.:..||...|:::....|
Human   126 DPFVAFHIN---KGLVKKY----MNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVERMGLMK 183

  Fly   137 SD-------LIHLGLV-----VSLYLLGIASAKYNSLLALVLASVALCWTVIVSHNYFH----RR 185
            ::       |:|:.|:     ::|::.|.:...:  ||..||.|........:.|::.|    ..
Human   184 ANHVFFLLYLLHILLLDGAAWLTLWVFGTSFLPF--LLCAVLLSAVQAQAGWLQHDFGHLSVFST 246

  Fly   186 DNWQ--MYAFNLGMMNFAA---WRVSHALSHHIYPNSYF---DLELSMFEPLLCWVPNPHIKSKL 242
            ..|.  ::.|.:|.:..|.   |...| ..||..||.:.   |:.:..|...|..:.:..:..:.
Human   247 SKWNHLLHHFVIGHLKGAPASWWNHMH-FQHHAKPNCFRKDPDINMHPFFFALGKILSVELGKQK 310

  Fly   243 MRYVSWVTEPVAYALAFFIQMGT----------RIFYSLRHTNILYWHDLL-PLTIPIAIY---- 292
            .:|:     |..:...:|..:|.          .|||.:....  .|.||. .:|..:..:    
Human   311 KKYM-----PYNHQHKYFFLIGPPALLPLYFQWYIFYFVIQRK--KWVDLAWMITFYVRFFLTYV 368

  Fly   293 --LGTGGSLGIWICVR----QWLAMTSIASFSFCLIGLNAAHHDP-EIYHEGDANREDRDWGLFQ 350
              ||....||::..||    .|            .:.:...:|.| .|.|:     .:.||...|
Human   369 PLLGLKAFLGLFFIVRFLESNW------------FVWVTQMNHIPMHIDHD-----RNMDWVSTQ 416

  Fly   351 VDTIIDRGDLKWSQFLVLTHFGDHVLHHLFPTLD----HGLLP------ALYPVLYQTLDEFKGH 405
            :....:.....::.:. ..|....:.||||||:.    |.:.|      |.:.:.||:    |..
Human   417 LQATCNVHKSAFNDWF-SGHLNFQIEHHLFPTMPRHNYHKVAPLVQSLCAKHGIEYQS----KPL 476

  Fly   406 LRECNHIEHMIGQHKQL 422
            |.....|.|.:.:..||
Human   477 LSAFADIIHSLKESGQL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_001260514.1 Cyt-b5 26..98 CDD:278597 21/72 (29%)
FA_desaturase 161..408 CDD:278890 59/290 (20%)
Membrane-FADS-like <328..385 CDD:294412 14/61 (23%)
FADS1NP_037534.5 PRK07003 <3..>75 CDD:235906 3/6 (50%)
PLN03199 74..496 CDD:178740 100/466 (21%)
Delta6-FADS-like 218..469 CDD:239583 55/276 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 45 1.000 Inparanoid score I5495
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1060606at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.870

Return to query results.
Submit another query.