DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-b5-r and yellow-c

DIOPT Version :10

Sequence 1:NP_477154.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_523570.3 Gene:yellow-c / 34879 FlyBaseID:FBgn0041713 Length:438 Species:Drosophila melanogaster


Alignment Length:193 Identity:39/193 - (20%)
Similarity:57/193 - (29%) Gaps:82/193 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 VSHNYFH----RRDNWQMYAFNLGMMNFAAWR-------------------VSHAL--------- 209
            |.||:||    ..|      ||:|.:|| .|.                   ..|||         
  Fly   250 VKHNFFHFDPLHGD------FNVGGVNF-QWTDGVFGLAVGPMNPDHSKDIYFHALASTKEFKVS 307

  Fly   210 -------SHHIYPNSYFDLE------------LSMFEP--------------LLCWVPNPHIKSK 241
                   ||....:||:|.:            ..:|:|              :.||    :||..
  Fly   308 NRVLQNESHVTAGDSYYDFKYVGDRGMNGQSTAEVFDPETGVIFYTQVNKDAIACW----NIKRP 368

  Fly   242 LMRYVSWVTEPVAYALAFFIQM-----GTRIFYSLRHTNILYWHDLLPLTIPIAIYLGTGGSL 299
            .......:.:..::.|.|...|     ||....|.:....|| .:|.|..:...|.:|....|
  Fly   369 YTPDTQGLIDSDSHTLVFPNDMKIDNEGTIWVLSDKMPTYLY-KELDPSAVNYRILMGQNRDL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_477154.1 Cyt-b5 34..100 CDD:459698
DesA 106..424 CDD:442471 39/193 (20%)
yellow-cNP_523570.3 MRJP 148..436 CDD:308585 39/193 (20%)
Blue background indicates that the domain is not in the aligned region.

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