DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-b5-r and F58B4.2

DIOPT Version :9

Sequence 1:NP_001260514.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001379137.1 Gene:F58B4.2 / 186494 WormBaseID:WBGene00010235 Length:89 Species:Caenorhabditis elegans


Alignment Length:88 Identity:19/88 - (21%)
Similarity:36/88 - (40%) Gaps:29/88 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EGLWRI-NDGIYDFTSFIDKHPGGPFWIRETKGTDITEAFEAHHLTTAPEKMIAKYKVRDAAEPR 103
            :.||.: .|.:|:.|.:.::||||...:|.. |.|:|        |..|                
 Worm    24 DDLWLLFRDKVYNMTPYFNQHPGGLAILRYA-GKDVT--------TVLP---------------- 63

  Fly   104 IYTLTLEEGGFYKTLKERVREQL 126
               ..:..|..:|.::::::|.|
 Worm    64 ---FVVSHGIAWKIVEQKLQEHL 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_001260514.1 Cyt-b5 26..98 CDD:278597 15/58 (26%)
FA_desaturase 161..408 CDD:278890
Membrane-FADS-like <328..385 CDD:294412
F58B4.2NP_001379137.1 Cyt-b5 13..88 CDD:395121 19/88 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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