DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-b5-r and fat-1

DIOPT Version :9

Sequence 1:NP_001260514.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001023560.1 Gene:fat-1 / 178291 WormBaseID:WBGene00001393 Length:402 Species:Caenorhabditis elegans


Alignment Length:427 Identity:89/427 - (20%)
Similarity:133/427 - (31%) Gaps:161/427 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 TKGTDITEAFEAHHLTTAPEKMIAKYKVRDAAEPRIYTLTLEEGGFYKTLKERVREQLKTIDK-R 132
            |.|..:.:|..:.....||..:.|..|.....||||                    ||.|:|. |
 Worm    16 TGGDVLVDARASLEEKEAPRDVNANTKQATTEEPRI--------------------QLPTVDAFR 60

  Fly   133 PKKKSDLIHLGLVVSL-YLLGIASAKYNSLLALVLASVA---------LCWTV----------IV 177
            ....:......||.|: ||:    ..:.:|..|..|..|         |.|.:          :|
 Worm    61 RAIPAHCFERDLVKSIRYLV----QDFAALTILYFALPAFEYFGLFGYLVWNIFMGVFGFALFVV 121

  Fly   178 SHNYFHR--RDNWQMYAFNLGMMNFA-------AWRVSHALSHHIYPNSYFDLELSMFEPLLCWV 233
            .|:..|.  .||..:..| :|.:.|:       .|:.||.| ||.:.| :.|.:           
 Worm   122 GHDCLHGSFSDNQNLNDF-IGHIAFSPLFSPYFPWQKSHKL-HHAFTN-HIDKD----------- 172

  Fly   234 PNPHIKSKLMRYVSWVTEPVAYALAFFIQMGTRIFYSLRHTNILYWHDLLPLTIPIAIYLG-TGG 297
             :.|:         |:.:....|:..:    .|.|..:..:..|.|       .|:....| ..|
 Worm   173 -HGHV---------WIQDKDWEAMPSW----KRWFNPIPFSGWLKW-------FPVYTLFGFCDG 216

  Fly   298 S--------------------LGIWICVRQWLAMTSIASFS---------FCLIGLNAA------ 327
            |                    .||..||..::|:|...|:|         ....||...      
 Worm   217 SHFWPYSSLFVRNSERVQCVISGICCCVCAYIALTIAGSYSNWFWYYWVPLSFFGLMLVIVTYLQ 281

  Fly   328 HHD--PEIYH-------EGDANREDRDWGLFQVDTIIDRGDLKWSQFLVLTHFGD-HVLHHLFPT 382
            |.|  .|:|.       .|.....||.:|| .:||             .:.|..| ||.||.|..
 Worm   282 HVDDVAEVYEADEWSFVRGQTQTIDRYYGL-GLDT-------------TMHHITDGHVAHHFFNK 332

  Fly   383 LDH--------GLLPALYPVLYQTLDEFKGHLRECNH 411
            :.|        |:...|.|:    .|...|:..:.|:
 Worm   333 IPHYHLIEATEGVKKVLEPL----SDTQYGYKSQVNY 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_001260514.1 Cyt-b5 26..98 CDD:278597 7/28 (25%)
FA_desaturase 161..408 CDD:278890 67/328 (20%)
Membrane-FADS-like <328..385 CDD:294412 18/66 (27%)
fat-1NP_001023560.1 DesA 52..387 CDD:225779 78/371 (21%)
Delta12-FADS-like 70..338 CDD:239584 67/320 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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