DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyt-b5-r and fat-3

DIOPT Version :9

Sequence 1:NP_001260514.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001255426.1 Gene:fat-3 / 177820 WormBaseID:WBGene00001395 Length:443 Species:Caenorhabditis elegans


Alignment Length:488 Identity:102/488 - (20%)
Similarity:167/488 - (34%) Gaps:154/488 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DDGAEGLWRINDG--IYDFTSFIDKHPGGPFWIRETKGTDITEAFEAHHLTTAPEKMIAKYKVRD 98
            |..|.||....||  :|.....:.|||||.. |.:.:.:|.|..|.|.|     |.....||..|
 Worm     4 DKNASGLRMKVDGKWLYLSEELVKKHPGGAV-IEQYRNSDATHIFHAFH-----EGSSQAYKQLD 62

  Fly    99 AAEPRIYTLTLEEGGFY-----KTLKER--------------VREQLKTIDKRPKKKSDLIHLGL 144
                     .|::.|.:     |.|::|              |.::.|.::...|.:..|...||
 Worm    63 ---------LLKKHGEHDEFLEKQLEKRLDKVDINVSAYDVSVAQEKKMVESFEKLRQKLHDDGL 118

  Fly   145 VVS--LYLLG--------IASAKYNSLLALVLAS---VALCWTVI--VSHNYFHRR--------D 186
            :.:  .|.|.        :|.|.|...|...:.|   :||.|...  ::|.:.|::        |
 Worm   119 MKANETYFLFKAISTLSIMAFAFYLQYLGWYITSACLLALAWQQFGWLTHEFCHQQPTKNRPLND 183

  Fly   187 NWQMYAFNLGMMNFAA--WRVSHALSHHIYPNSY---FDLELSMFEPLLCWVPNPHIKSK----- 241
            ...::..|. :..|:.  |:..|. :||...|..   .|::|:   ||..::|....|.|     
 Worm   184 TISLFFGNF-LQGFSRDWWKDKHN-THHAATNVIDHDGDIDLA---PLFAFIPGDLCKYKASFEK 243

  Fly   242 ------------------LMRYVSWVTEPVAYAL-------------AFFIQ---MG--TRIFYS 270
                              ::|: ||..:.|.:..             ||:.|   :|  ..:||.
 Worm   244 AILKIVPYQHLYFTAMLPMLRF-SWTGQSVQWVFKENQMEYKVYQRNAFWEQATIVGHWAWVFYQ 307

  Fly   271 LRHTNILYWHDLLPLTIPIAIYLGTGGSLGIWICVRQWLAMTSIASFSFCLIGLNAAHHDPEIYH 335
                  |:.....||.:...|....||.          |.:..:.:|:         |:..:.| 
 Worm   308 ------LFLLPTWPLRVAYFIISQMGGG----------LLIAHVVTFN---------HNSVDKY- 346

  Fly   336 EGDANREDRDWGLFQVDTIIDRGDLKWSQFL--VLTHFGDHVLHHLFPTLDHGLLPALYPVL--- 395
              .||  .|....|....|:...::..|.|:  :.......:.||||||:....|.|....:   
 Worm   347 --PAN--SRILNNFAALQILTTRNMTPSPFIDWLWGGLNYQIEHHLFPTMPRCNLNACMKYVKEW 407

  Fly   396 -------YQTLDEFKGHLRECNHIEHMIGQHKQ 421
                   |...|.|.|:......:::| .:|.|
 Worm   408 CKENNLPYLVDDYFDGYAMNLQQLKNM-AEHIQ 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_001260514.1 Cyt-b5 26..98 CDD:278597 21/63 (33%)
FA_desaturase 161..408 CDD:278890 61/317 (19%)
Membrane-FADS-like <328..385 CDD:294412 15/58 (26%)
fat-3NP_001255426.1 Prefoldin <52..113 CDD:298833 12/69 (17%)
FA_desaturase 148..415 CDD:278890 56/302 (19%)
Delta6-FADS-like 150..413 CDD:239583 56/298 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1060606at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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