DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-b5-r and fat-4

DIOPT Version :9

Sequence 1:NP_001260514.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001255423.1 Gene:fat-4 / 177819 WormBaseID:WBGene00001396 Length:447 Species:Caenorhabditis elegans


Alignment Length:477 Identity:98/477 - (20%)
Similarity:161/477 - (33%) Gaps:158/477 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 EGLW-RINDGIYDFTSFIDKHPGGPFWIRETKGTDITEAFEAHHL-----------------TTA 86
            :|.| :|:|.:      :..||||.. |...|..|.|..|...|.                 |..
 Worm    16 DGKWCQIDDAV------LRSHPGGSA-ITTYKNMDATTVFHTFHTGSKEAYQWLTELKKECPTQE 73

  Fly    87 PEKMIAKYK---VRDAAEPRIYTLTLEE------GGFYKTLKERVREQLKTIDKRP----KKKSD 138
            ||  |...|   ::...:..:.|..:.|      ...:..|:.|||.: ..:|..|    :|..:
 Worm    74 PE--IPDIKDDPIKGIDDVNMGTFNISEKRSAQINKSFTDLRMRVRAE-GLMDGSPLFYIRKILE 135

  Fly   139 LIHLGLVVSLYLLGIASAKYNS--LLALVLASVA---LCWTV--IVSHNYFHRRDNWQMYAFNLG 196
            .| ..::.:.||      :|::  |.:.:|..||   |.|.:  ...|..|..|....:.::.:|
 Worm   136 TI-FTILFAFYL------QYHTYYLPSAILMGVAWQQLGWLIHEFAHHQLFKNRYYNDLASYFVG 193

  Fly   197 MMNF------AAWRVSHALSHHIYPNSY---FDLELSMFEPLLC----------WVPN----PHI 238
              ||      ..|:..|.: ||...|..   .||:|..|...:.          ||..    .|:
 Worm   194 --NFLQGFSSGGWKEQHNV-HHAATNVVGRDGDLDLVPFYATVAEHLNNYSQDSWVMTLFRWQHV 255

  Fly   239 KSKLM---RYVSWVTEPVAYALAFFIQMGTRIFYSLRHTNI-------LYW-------HDLLPLT 286
            ....|   ..:||:.:    ::.|..||.|..:...|:|.|       |:|       :.|...:
 Worm   256 HWTFMLPFLRLSWLLQ----SIIFVSQMPTHYYDYYRNTAIYEQVGLSLHWAWSLGQLYFLPDWS 316

  Fly   287 IPIAIYLGT---GGSLGIWI------CVRQWLAMTSIASFSFCLIGLNAAHHDPEIYHEGDANRE 342
            ..|..:|.:   ||.|...:      .|.::...::|.|...||..:...:..|..:        
 Worm   317 TRIMFFLVSHLVGGFLLSHVVTFNHYSVEKFALSSNIMSNYACLQIMTTRNMRPGRF-------- 373

  Fly   343 DRDW---GL-FQVDTIIDRGDLKWSQFLVLTHFGDHVLHHLFPTLDHGLLPALYPVL-------- 395
             .||   || :|::                        ||||||:....|..:.|::        
 Worm   374 -IDWLWGGLNYQIE------------------------HHLFPTMPRHNLNTVMPLVKEFAAANG 413

  Fly   396 --YQTLDEFKGHLRECNHIEHM 415
              |...|.|.|...|.....::
 Worm   414 LPYMVDDYFTGFWLEIEQFRNI 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_001260514.1 Cyt-b5 26..98 CDD:278597 19/78 (24%)
FA_desaturase 161..408 CDD:278890 65/314 (21%)
Membrane-FADS-like <328..385 CDD:294412 12/60 (20%)
fat-4NP_001255423.1 FA_desaturase 152..417 CDD:278890 61/304 (20%)
Delta6-FADS-like 153..414 CDD:239583 61/300 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1060606at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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