DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyt-b5-r and fads1

DIOPT Version :10

Sequence 1:NP_477154.1 Gene:Cyt-b5-r / 35008 FlyBaseID:FBgn0000406 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_002943012.2 Gene:fads1 / 100489232 XenbaseID:XB-GENE-6033417 Length:434 Species:Xenopus tropicalis


Alignment Length:481 Identity:109/481 - (22%)
Similarity:179/481 - (37%) Gaps:153/481 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ITTHSWQKGKRQDDGAEGLWRINDGIYDFTSFIDKHPGGPFWIRETKGTDITEAFEAHHL----- 83
            :|.::|::.|::....|....||..:||.|.|::.|||||..|....|.|.|:.|.|.|:     
 Frog     7 LTCYTWEEVKKRCTREERWLVINRKVYDITRFVNIHPGGPRVISHYAGQDATDPFVAFHIDQELV 71

  Fly    84 ----------TTAP-EKMIAKYKVRDAA---EPRIYTLTLEEGGFYKTLKERVREQLKTIDKRPK 134
                      ..|| |..|..:|  |||   :.|....|:|:.|.:                .|.
 Frog    72 KKRMCCLLIGELAPGEPSIEPFK--DAAMVEDFRALRTTVEQMGLF----------------HPS 118

  Fly   135 KKSDLIHLGLVVSLYLLGIASAKY--NSLLALVLASVALC-------WTVIVSHNYFH----RRD 186
            |....:.|..|:.|.:|...:..|  .||::|::.::.|.       |   :.|::.|    .|.
 Frog   119 KLFFFVTLLHVLLLDVLAYVTMYYGGTSLISLLVTALLLATVQAQAGW---LQHDFGHLSVFSRS 180

  Fly   187 NWQ--MYAFNLGMMNFAA---WRVSHALSHHIYPNSY-FDLELSMFEPLLC-------------- 231
            :|.  ::.|.:|.:..|.   |...| ..||..||.: .|.:::| .|||.              
 Frog   181 SWNHVVHQFVIGHLKGAPASWWNHLH-FQHHAKPNCFRKDPDINM-HPLLFALGKKLSVELGMKK 243

  Fly   232 --WVPNPHIKSKLMRYVSWVTEPVAYALAF--FIQMGTRIFYSLRHTNILYWHDLLPLT------ 286
              ::|..|    ..:|..::..|....:.|  :|     .::::|...   |.||..:.      
 Frog   244 KKYMPYNH----QHKYFFFIGPPALIPVYFQWYI-----FYFAIRRKK---WADLAWMISFYVRF 296

  Fly   287 ----IPIAIYLGTGGSLGIWICVR----QWLAMTSIASFSFCLIGLNAAHHDPEIYHEGDANRED 343
                ||   :||..|::.:::.||    .|            .:.:...:|.| :..:.|.|:| 
 Frog   297 GLCYIP---FLGVSGTIALFMVVRFIESNW------------FVWVTQMNHIP-MNIDYDQNKE- 344

  Fly   344 RDWGLFQVDTI--IDRGDLKWSQFLVLTHFGDH----VLHHLFPTLD-HGLLPAL---------Y 392
              |...|:...  :|       |.|....|..|    :.||||||:. |....|.         |
 Frog   345 --WLSTQLQATCNVD-------QSLFNDWFSGHLNFQIEHHLFPTMPRHNYWKAAPLVRSLCKKY 400

  Fly   393 PVLYQTLDEFKG------HLRECNHI 412
            .:.||:...|..      .|||...:
 Frog   401 GIEYQSKPLFTAFADIVHSLRESGEL 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyt-b5-rNP_477154.1 Cyt-b5 34..100 CDD:459698 25/81 (31%)
DesA 106..424 CDD:442471 78/380 (21%)
fads1XP_002943012.2 PLN03198 5..425 CDD:178739 109/478 (23%)
Delta6-FADS-like 161..402 CDD:239583 58/283 (20%)

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