DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhc and YPR089W

DIOPT Version :10

Sequence 1:NP_523587.4 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:NP_015414.2 Gene:YPR089W / 856204 SGDID:S000006293 Length:888 Species:Saccharomyces cerevisiae


Alignment Length:1003 Identity:186/1003 - (18%)
Similarity:343/1003 - (34%) Gaps:285/1003 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1091 AKLEDEQV---VVLKH-QRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEE 1151
            |::||..|   |...| |.::..:::.:.:|::|...|..:..:..|...|              
Yeast     8 ARIEDRTVDKPVGSSHAQEKLALVKSTLFKLDQEDRPECDSWVQLVKLICD-------------- 58

  Fly  1152 AGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKA 1216
                        :.||.|.:..:..|.|....::.::..:...|...|.:.|:.::.|:...:.|
Yeast    59 ------------EDREEEFTTFKELLREVKNVNDKSVTGVALIHYIIVFDRADYIELLHDNPSGA 111

  Fly  1217 EKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLN--------DFD 1273
            :.:.|.           ||.|..........:.|.::...|:.:..||.|..:.        |..
Yeast   112 KLDLNL-----------VDDIVGYTPLMWSFSLQRRNCCLELFNAFDEINFNMTNKAGLTAWDMV 165

  Fly  1274 ASKKKLS--IENSDLLRQLEEAESQVSQLSKIK-ISLTTQLED--TKRLADEESRERATLL---G 1330
            .....||  :|.:::.|...|.:.::.|:|:.| .||....||  ||...|....:.|.|.   |
Yeast   166 PPYSPLSEFLEQNNMFRYRTEVKHEIPQISQPKDTSLLMSNEDSTTKETFDNIDLQVAGLTLSPG 230

  Fly  1331 KFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQAR 1395
            ...|:..|.|   |:....::|.|.|   :.....|.  :...::.|.::..:.||.:...:...
Yeast   231 ANDNMFLDSD---EKNMNHSQGAATL---IDPTYTED--YHGTFDYDKLSPDQYLEFSDFDIPQI 287

  Fly  1396 LAEAEETIESLNQK--------------CIGLEKTKQRLSTEVEDL-QLEVDR------ANAIAN 1439
            |    ..:.||.||              ||.....|.:....||.| .|.:.:      :|..|.
Yeast   288 L----NLLISLPQKEPHMTTYPAGLIYQCIRYADHKIKSKPLVESLINLSLTKILTSVSSNGAAG 348

  Fly  1440 --AAEKKQKAFDKII-GEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRREN 1501
              :.|...:|.|.:: ..|...:..|...|      ||:.|  .|:...:..  ||.:..:....
Yeast   349 LVSTEASLQAGDIVLQSYWLSCLSFLYYYL------CRDDS--FFKRHPSVL--QELINTIHSII 403

  Fly  1502 KNLADEVK----DLLDQIGEGGRNIHEIEKA---------RKRLEAEKDELQAALEEAEAALEQE 1553
            ..|...:.    .|:|........|.::::.         :||            ::|:..|:::
Yeast   404 IELTSSIHCRLISLIDSTLLAYTTIQDVKQTLYKRDWNFFKKR------------KQAKLLLKEK 456

  Fly  1554 ENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLE 1618
            ..|.|:     .|.::|:.|:.|.:|        ||:.. :..|...:::.:....         
Yeast   457 NRKQLK-----EQQKKELHRKSQGQE--------NHEEE-EGQQDGNDSDDRASTN--------- 498

  Fly  1619 ADINELEIALDHANKANAEAQKNIKR------YQQQLKD-----------IQTALEEEQRARDDA 1666
             |.|...::|.:        .|.|.|      :::|:|.           :...|...|......
Yeast   499 -DDNNSSVSLFY--------DKEILRHLYPPSFEEQMKPSPLKIVQIFGALSYVLNLHQTHPIFQ 554

  Fly  1667 REQLGISER-RANALQNELEESRTLLEQADRGRRQAEQELADAHE---QLN----EVSAQNASIS 1723
            ::.|.||.. .|..|.|::.:        |:.:|    .|:.||.   :||    |...||....
Yeast   555 QQCLSISVNWFATTLFNKILK--------DKKKR----SLSRAHAIQIRLNLSTLESWIQNNDFC 607

  Fly  1724 AAKRKLESEL------QTLHSDLDE-------LLNEA--KNSEEKAKKAMVDAA----------- 1762
            ..|..|..:.      .||..|:.|       |.|.|  |..:|..|..:.|.:           
Yeast   608 VPKPMLIDDFMWQRFPMTLIRDVGEIDLSDPILRNVATYKPIDENNKDLIYDTSNSLFYYQPFHK 672

  Fly  1763 ----------------RLADELRAEQDHAQTQEKLRK----ALEQQIKELQVRLDEAEANALKGG 1807
                            ::|..|.:|:....|...|.:    .|.:.:::....|:|.:.|:    
Yeast   673 IAQIHLEPVFQLLQWLQVATTLDSEESLISTMNLLPRITPVQLLKSMEKYNYELNENKFNS---- 733

  Fly  1808 KKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSE------RRVKELSFQSEEDRKNHERMQDL 1866
                 ||:   :.|.|::...:...|||.  |::.|      ..:.|::....:...:|.....|
Yeast   734 -----KLK---KFLNNKIKDSKMSKADAY--LQEHEIPYLVLPTIPEMTDLYSKGPDSHSFQPFL 788

  Fly  1867 VDKLQQKIKTYK------RQIEEAEEIAALN--LAKFR----KAQQELEEAEERADLAEQAISKF 1919
            ...:|..:  |:      :|.:...:|:..|  .:.|.    |||.|.|...|..|:.|..    
Yeast   789 PGSIQDDV--YEIHDVNFKQRQNEPQISRTNSGTSDFTGDEDKAQYETEGVGESIDINETV---- 847

  Fly  1920 RAKGRAGSVGRG----ASPAPRATSVRP 1943
            ..:..|.:||..    ....|.:|:.||
Yeast   848 EPESNAFNVGNDDYFKELNIPSSTAQRP 875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_523587.4 Myosin_N 33..75 CDD:460670
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874
Myosin_tail_1 842..1922 CDD:460256 179/976 (18%)
YPR089WNP_015414.2 Ank_2 67..152 CDD:463710 16/95 (17%)
Myo5p-like_CBD_DIL_ANK 275..776 CDD:271257 104/584 (18%)
Blue background indicates that the domain is not in the aligned region.

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