DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhc and MYO19

DIOPT Version :10

Sequence 1:NP_523587.4 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_011523588.1 Gene:MYO19 / 80179 HGNCID:26234 Length:1047 Species:Homo sapiens


Alignment Length:984 Identity:271/984 - (27%)
Similarity:409/984 - (41%) Gaps:247/984 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GGETRDLKKDLLQQVNPPKYEKAEDMSNLTYLNDASVLHNLRQRYYNKLIYTYSGLFCVAINPYK 130
            |||....|.|.|.:|||...|              :||..|:.||.....||.:|...||:||:|
Human    29 GGEVLLYKLDDLTRVNPVTLE--------------TVLRCLQARYMADTFYTNAGCTLVALNPFK 79

  Fly   131 RYP-VYTNRCAKMYR-----------------------GKRRN---------EVPPHIFAISDGA 162
            ..| :|:....:.|.                       |:..|         ::.||:|.:.:..
Human    80 PVPQLYSPELMREYHAAPQPQQCGHSESASATACPIGAGRILNHEELTTGQKKLKPHVFTVGEQT 144

  Fly   163 Y--VDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQTNPV 225
            |  |..|...||||::::||||||||..::.::.::|.|..|..:.|:.|....:|.:::.:|||
Human   145 YRNVKSLIEPVNQSIVVSGESGAGKTWTSRCLMKFYAVVATSPASWESHKIAERIEQRILNSNPV 209

  Fly   226 LEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMS 290
            :||||||.|:||:|||||||||::......::.||.::||||||.||..|.|.||::||||||..
Human   210 MEAFGNACTLRNNNSSRFGKFIQLQLNRAQQMTGAAVQTYLLEKTRVACQASSERNFHIFYQICK 274

  Fly   291 GSVPGVKDICLLTDNIYDYHIVSQGKVT-----VASIDDAEEFSLTDQAFDILGFTKQEKEDVYR 350
            |:         ..|....:|:......:     ..|::: :.|.:|.:|...||.....:.::::
Human   275 GA---------SEDERLQWHLPEGAAFSWLPNPERSLEE-DCFEVTREAMLHLGIDTPTQNNIFK 329

  Fly   351 --------------------------------------------ITAAVMHMGGMKFKQRGREEQ 371
                                                        :.|.::|:|.::|.....|.|
Human   330 TAPEQQEGIDRMAWQSRKGGHFREVAMQWKVTLTSRWGLLRHCQVLAGLLHLGNIQFAASEDEAQ 394

  Fly   372 AEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGA----------L 426
            ..|..::.....|.........|.:::|...:::  ..:..||. |||.....|          |
Human   395 PCQPMDDAKCEDSVRTAASLLGLPEDVLLEMVQI--RTIRAGRQ-QQVFRKPCARAECDTRRDCL 456

  Fly   427 CKGVFDRLFKWLVKKCNETL--DTQQKRQHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFN 489
            .|.::.|||.|||...|.::  ||..... |||:||:.|||.|..|..||||||:.||||||.|.
Human   457 AKLIYARLFDWLVSVINSSICADTDSWTT-FIGLLDVYGFESFPDNSLEQLCINYANEKLQQHFV 520

  Fly   490 HHMFVLEQEEYQREGIEWTFIDFGMDLQLCIDLIE-KPMGILSILEEESMFPKATDQTFSEKLTN 553
            .|....:||||..||:||:||:: .|.|.|:|||| .|:.|.|::.||....:.:.....:....
Human   521 AHYLRAQQEEYAVEGLEWSFINY-QDNQPCLDLIEGSPISICSLINEECRLNRPSSAAQLQTRIE 584

  Fly   554 THLGKSAPFQKPKPPKPG----QQAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQN 614
            |.|..|        |..|    .:...|.:.||||.|.|:..|.:||||||:...:....::||:
Human   585 TALAGS--------PCLGHNKLSREPSFIVVHYAGPVRYHTAGLVEKNKDPIPPELTRLLQQSQD 641

  Fly   615 KLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEM 679
            .||:.:|..:..:....|..    |:......||.|.:|..|..|:..|.||.||::|||.||..
Human   642 PLLMGLFPTNPKEKTQEEPP----GQSRAPVLTVVSKFKASLEQLLQVLHSTTPHYIRCIKPNSQ 702

  Fly   680 KQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIM------------------ 726
            .|........|:.||...|::|.|.|...|||.|:.:.:|..|||::                  
Human   703 GQAQTFLQEEVLSQLEACGLVETIHISAAGFPIRVSHRNFVERYKLLRRLHPCTSSGPDSPYPAK 767

  Fly   727 -----CPKLLQGVEKDKKATEIIIKFI-------------------DLPEDQYRLGNTKVFF--- 764
                 ||      ..::...|.:|:.|                   .:|...: .|.||||.   
Human   768 GLPEWCP------HSEEATLEPLIQDILHTLPVLTQAAAITGDSAEAMPAPMH-CGRTKVFMTDS 825

  Fly   765 --------RAGVLGQM-----------EEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVAL 810
                    ||.||.|.           .....||..:.:..:||..|.:|:||..::|......:
Human   826 MLELLECGRARVLEQCARCIQGGWRRHRHREQERQWRAVMLIQAAIRSWLTRKHIQRLHAAATVI 890

  Fly   811 KVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLEEKAKK----AEELHAAEVKVRKE 871
            |                  :.|||.:            .|:...|.|    .||.|.::......
Human   891 K------------------RAWQKWR------------IRMACLAAKELDGVEEKHFSQAPCSLS 925

  Fly   872 LEALNAKLL 880
            ...|..:||
Human   926 TSPLQTRLL 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_523587.4 Myosin_N 33..75 CDD:460670 4/8 (50%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 234/818 (29%)
Myosin_tail_1 842..1922 CDD:460256 9/43 (21%)
MYO19XP_011523588.1 MYSc_Myo19 49..823 CDD:276846 235/821 (29%)

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