DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhc and myh9b

DIOPT Version :10

Sequence 1:NP_523587.4 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:NP_001427874.1 Gene:myh9b / 561431 ZFINID:ZDB-GENE-030131-998 Length:1960 Species:Danio rerio


Alignment Length:1962 Identity:775/1962 - (39%)
Similarity:1191/1962 - (60%) Gaps:35/1962 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DEDPTPYLFVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL-QGGETRDLK 73
            |.|...|:..:|....:.|: .:.:||..|:|.|:.|:..|.:|...||.|.|.| ..|:...:.
Zfish     3 DVDKFLYVDRNLVNNPLAQA-DWATKKLVWVPSERLGFEAGSLKEEHGDEVVVELADSGKKIRVN 66

  Fly    74 KDLLQQVNPPKYEKAEDMSNLTYLNDASVLHNLRQRYYNKLIYTYSGLFCVAINPYKRYPVYTNR 138
            ||.:|::||||:.|.|||:.||.||:|||||||::|||:.|||||||||||.|||||..|:|:..
Zfish    67 KDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLKERYYSGLIYTYSGLFCVVINPYKNLPIYSEE 131

  Fly   139 CAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASK 203
            ...||:||:|:|:||||:||:|.||..|:.:..:||:|.||||||||||||||||.|.|.|.:|.
Zfish   132 IVDMYKGKKRHEMPPHIYAITDTAYRSMMQDREDQSILCTGESGAGKTENTKKVIQYLAHVASSH 196

  Fly   204 KT--DEAAK--SKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIET 264
            ||  |:::.  |.|.||.|::|.||:||||||||||:|||||||||||||:|...|.:.||:|||
Zfish   197 KTKKDQSSSVLSHGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVNGYIVGANIET 261

  Fly   265 YLLEKARVISQQSLERSYHIFYQIMSGSVPGVK-DICLLTDNIYDYHIVSQGKVTVASIDDAEEF 328
            |||||:|.|.|...||::|:||.:::|....:: ::||  :....|..:|.|.||:....|.:.:
Zfish   262 YLLEKSRAIRQAKEERTFHMFYYMLTGVGDKLRSELCL--EGYNKYRFLSNGNVTIPGQQDRDMY 324

  Fly   329 SLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAE 393
            ..|.:|..|:||:::|...:.|:.::|:.:|.|.||:....:||....:....:|..|.|.:..:
Zfish   325 VETVEAMRIMGFSEEEHVGLLRVISSVLQLGNMSFKKERHSDQASMPDDTAAQKVCHLMGMNVTD 389

  Fly   394 LYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLD-TQQKRQHFIG 457
            ..:.:|.||||||.::|.:.:..:|...::.||.|..::|:|:|||.:.|:.|| |:::...|||
Zfish   390 FTRAILSPRIKVGRDYVQKAQTQEQAEFAVEALAKATYERMFRWLVMRINKALDKTKRQGASFIG 454

  Fly   458 VLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYQREGIEWTFIDFGMDLQLCIDL 522
            :||||||||||.|.|||||||:|||||||.|||.||:|||||||||||||:|||||:|||.||||
Zfish   455 ILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWSFIDFGLDLQPCIDL 519

  Fly   523 IEKPM---GILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAG 584
            ||||.   |||::|:||..||||||::|.||:.... |....|.|||..|   ..|.|.|.||||
Zfish   520 IEKPASPPGILALLDEECWFPKATDKSFVEKVLQEQ-GTHPKFHKPKKLK---DEADFCIIHYAG 580

  Fly   585 CVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFAD-----HAGQSGGGEQAKGGRGKKGGG 644
            .|.|....||.||.|||||.|.....:|.::.:.|::.|     ...:..|..:..|....:.|.
Zfish   581 KVDYKADEWLMKNMDPLNDNVATLLNQSTDRFVSELWKDVDRIVGLDKVAGMSELPGAFKTRKGM 645

  Fly   645 FATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKG 709
            |.||...|||||:.||.|||:|.|:||||||||..|:.|.:|.|||:.||.||||||||||||:|
Zfish   646 FRTVGQLYKEQLSKLMATLRNTNPNFVRCIIPNHEKKAGKLDPHLVLDQLRCNGVLEGIRICRQG 710

  Fly   710 FPNRMMYPDFKMRYKIMCPKLL-QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQME 773
            ||||:::.:|:.||:|:.|..: :|....|:|..::|:.::|..:.||:|.:|||||||||..:|
Zfish   711 FPNRIVFQEFRQRYEILTPNSIPKGFMDGKQACMLMIRALELDPNLYRIGQSKVFFRAGVLAHLE 775

  Fly   774 EFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPL 838
            |.||.::..::...|||.|||::||.|.|.|:|..|::|:|||...||:||.|.|::|:.|||||
Zfish   776 EERDMKITDVIINFQAWCRGYVARKAFAKRQQQLTAMRVIQRNCAAYLKLRNWQWWRLFTKVKPL 840

  Fly   839 LNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQER 903
            |.|||.|:|:...||:..|..|......:...|:|....:|.|||.||.:.|..|.....:..|.
Zfish   841 LQVSRQEEEMQAKEEELSKVREKQQVAEQQLVEMEVKQQQLNAEKMALQEQLQAEMDLCAEADEM 905

  Fly   904 NAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKA 968
            ..:|.|:|.:||..|.|::.|:.:||:..|.|..:|||..|.|:.|::.:::.|...||.:.:|.
Zfish   906 RNRLVAKKQELEEILHDLEARVEEEEERANHLQAEKKKMQQNIADLEQQLDEEEAARQKLQLEKV 970

  Fly   969 TKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDEL 1033
            |.:.:::...:|:...|:..|||:||||:..|...:....|...|:|...|.|:|.|.|..:.:|
Zfish   971 TMEAKLKKTEEEVMVLDDQNNKLSKEKKLMEERIAEFTTNLAEEEEKSKSLQKLKNKHEAMITDL 1035

  Fly  1034 EDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLEDEQV 1098
            ||.|.||:|.|.::||::||:|||.....:.:|:|:....||:..:.:|::||....|::|:|..
Zfish  1036 EDRLRREEKQRQELEKNRRKLEGDSTELHDQIAELQAQIAELKAQLAKKEEELQEALARIEEEAA 1100

  Fly  1099 VVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELN 1163
            .....|::|:||::::.||:|::|.||.||.||||.|.||..|||.|...||:...:|:||.||.
Zfish  1101 QKNLAQKKIRELESQLSELQEDLELERAARTKAEKHRRDLGEELEALKTELEDTLDSTAAQQELR 1165

  Fly  1164 KKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLN 1228
            .|||.|:::|::.|||....||..:|.:|:||:.|..|:.||::|:.:.|...||.|.....:.|
Zfish  1166 TKRETEVAQLKKALEEDAKVHEQVMAEIRQKHSQAFDELNEQLEQVKRNKVSVEKSKQALESERN 1230

  Fly  1229 DLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEA 1293
            :|:..:..:...|...|...|:.:..|.|:|.|..|:.|...:......|:..|..::...|.:|
Zfish  1231 ELQIELQTLMQGKGESEHRRKKAEAQLQELQVKHTESERQRIELAERLTKMQAELDNVNTLLSDA 1295

  Fly  1294 ESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQR 1358
            |.:..:.||...::.:||:|.:.:..||:|::.:|..:.|.||.:..:||||:|||.|.|.:|::
Zfish  1296 EGKSIKASKDCSTVESQLQDVQEVLQEETRQKLSLNTRLRQLEDEQHSLREQLEEEEEAKRNLEK 1360

  Fly  1359 QLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTE 1423
            |:....|:....:.|.|.:. ...|..||:::::|..|....:.::..|.....|:|||.||..|
Zfish  1361 QIGTMQAQLVDMKKKMEQES-GSLECAEESRKRVQRDLEAVSQRLDERNAAFDKLDKTKTRLQQE 1424

  Fly  1424 VEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYE 1488
            ::|:.::.|....|.:..|||||.||:::.|.|......|.|.|.::.|.|...|.:..|....|
Zfish  1425 LDDMLVDQDHLRQIVSNLEKKQKKFDQMLAEEKSISARYAEERDRAEAEAREKETRMLALARELE 1489

  Fly  1489 EGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQE 1553
            ...:..|.:.|.||.|..|::||:....:.|:::|::||:::.:|.:.:|::..|||.|..|:..
Zfish  1490 TLTDMKEELDRTNKLLRAEMEDLVSSKDDVGKSVHDLEKSKRAMEQQLEEMKTQLEELEDELQAT 1554

  Fly  1554 ENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLE 1618
            |:..||.::.:..::.:.:|.:|.::|..|..::...:.:..|:..||.|.|.:..|:..:||:|
Zfish  1555 EDAKLRLEVNMQAMKAQYERDLQGRDELGEEKKRQLLKQVREMEMELEDERKQRTLAMAARKKME 1619

  Fly  1619 ADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNE 1683
            .|:.|||.|:|.|||...||.|.:|:.|.|:||:...||:.:.:|::...|...:|::..:::.|
Zfish  1620 LDLKELEAAIDQANKNRDEALKQLKKVQAQMKDLLRELEDTRLSREEILAQSKENEKKVKSMEAE 1684

  Fly  1684 LEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAK 1748
            :.:.:..|..|:|.:|||:||..:..:::|..:|:.|..|..:|:||:.:..|..:|:|..|..:
Zfish  1685 MIQMQEELAAAERAKRQAQQERDELQDEINNQAAKGALGSEERRRLEARIAQLEEELEEEQNNTE 1749

  Fly  1749 NSEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQK 1813
            ...::.|:|::...::..||.||:..:|..|..|...|:|.|||:::|.|.|.......|..|..
Zfish  1750 LVNDRLKRALLQTDQMNVELTAERSTSQRLEGARSQQERQNKELKLKLTELEGTVKSKYKATIAA 1814

  Fly  1814 LEQRVRELENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYK 1878
            ||.::.:||.:||.|.|....|.|.:|::|:::||:..|.:::|:|.|:.:|..|||..::|..|
Zfish  1815 LEAKIGQLEEQLDVETRERQQASKLVRRTEKKLKEVILQVDDERRNTEQYKDQSDKLNSRMKQLK 1879

  Fly  1879 RQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGRAGSV-----------GRGA 1932
            ||:|||||.|....|..||.|:|||:|.|.||...:.::..::|.|.|.:           |..:
Zfish  1880 RQLEEAEEEAQRANANRRKLQRELEDATESADAMNREVNSLKSKLRRGDLPFTMRRIVSRSGIES 1944

  Fly  1933 SPAPRATSVRPQ 1944
            ...|.|.|..|:
Zfish  1945 DEDPEAKSETPE 1956

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_523587.4 Myosin_N 33..75 CDD:460670 14/42 (33%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 340/679 (50%)
Myosin_tail_1 842..1922 CDD:460256 352/1079 (33%)
myh9bNP_001427874.1 None

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