Sequence 1: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_061198.2 | Gene: | MYO5C / 55930 | HGNCID: | 7604 | Length: | 1742 | Species: | Homo sapiens |
Alignment Length: | 1511 | Identity: | 449/1511 - (29%) |
---|---|---|---|
Similarity: | 731/1511 - (48%) | Gaps: | 224/1511 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 YDSKKSCWIPDEKEGYLLGEIKA--TKGD-IVSVGLQGGEVRD--IKSEKVEKV-NPPKFEKIED 90
Fly 91 MADMTVLNTPCVLHNLRQRY-YAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPH 154
Fly 155 IFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQV 219
Fly 220 VQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHI 284
Fly 285 FYQI-MSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFTKQEKEDV 348
Fly 349 YRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQG 413
Fly 414 RNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYNGFEQLCIN 478
Fly 479 FTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILEEESMFPKAT 543
Fly 544 DQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQ 608
Fly 609 FKKSQNKLLIEIFADHA------GQSGGGEQAKGGRGKKGGGF-ATVSSAYKEQLNSLMTTLRST 666
Fly 667 QPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMCPKLL 731
Fly 732 QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLS 796
Fly 797 RKGFKKLQEQR---------------------VALK------VVQRNLRKYLQLRTWPWYKLWQK 834
Fly 835 VKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQD 899
Fly 900 YQE-----RNAKLTAQKNDLENQLRD-------IQERLTQEEDARNQLFQQKKKADQEISGLKKD 952
Fly 953 IEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQ-KTGEELQAAEDKI 1016
Fly 1017 NHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQR 1081
Fly 1082 KDKELSSITAKLEDEQVV-------VLKHQRQIKELQARIEELEEEVEAERQARAKAEK----QR 1135
Fly 1136 ADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLA--NLRKKHNDA 1198
Fly 1199 VAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQ---LQHTLNEVQS 1260
Fly 1261 KLDETNRTLNDFDASKKKLSIENSDL-LRQLEEAESQVSQLSKIKISL--TTQLEDTKRLADE-- 1320
Fly 1321 ---ESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARS 1382
Fly 1383 EELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKA 1447
Fly 1448 FDKIIGEWKLKVDDLA 1463 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 12/41 (29%) |
MYSc | 81..777 | CDD:214580 | 270/704 (38%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 261/673 (39%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 143/659 (22%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | |||
ATP-synt_B | <1671..1771 | CDD:304375 | |||
TMPIT | 1739..>1825 | CDD:285135 | |||
MYO5C | NP_061198.2 | Myosin_N | 12..48 | CDD:280832 | 11/35 (31%) |
MYSc | 62..752 | CDD:214580 | 270/703 (38%) | ||
MYSc_Myo5 | 81..741 | CDD:276831 | 261/673 (39%) | ||
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 | 632..654 | 13/21 (62%) | |||
IQ | 810..828 | CDD:197470 | 6/30 (20%) | ||
COG1340 | 890..1150 | CDD:224259 | 73/316 (23%) | ||
P-loop_NTPase | <910..>1163 | CDD:304359 | 73/314 (23%) | ||
GBP_C | <927..1030 | CDD:303769 | 29/122 (24%) | ||
coiled coil | 997..1010 | CDD:293879 | 4/12 (33%) | ||
coiled coil | 1019..1030 | CDD:293879 | 4/14 (29%) | ||
Rab5-bind | 1020..1345 | CDD:286404 | 85/392 (22%) | ||
DUF3585 | 1160..1326 | CDD:304905 | 40/197 (20%) | ||
Myo5c_CBD | 1369..1736 | CDD:271260 | 2/4 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |