DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhc and MYH4

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:NP_060003.2 Gene:MYH4 / 4622 HGNCID:7574 Length:1939 Species:Homo sapiens


Alignment Length:1923 Identity:1064/1923 - (55%)
Similarity:1430/1923 - (74%) Gaps:15/1923 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DPTPYLFVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRDIKSEK 76
            :..|:|..|.::|...|:||:|:|.|.::.|.||.|:...:::.:|..|:...:.|....:|.::
Human    12 EAAPFLRKSEKERIEAQNKPFDAKTSVFVVDPKESYVKAIVQSREGGKVTAKTEAGATVTVKEDQ 76

  Fly    77 VEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAK 141
            |..:||||::||||||.||.|:.|.||:||::||.|.:||||||||||.:||||..|||......
Human    77 VFSMNPPKYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPEVVT 141

  Fly   142 MYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATV---GASK 203
            .||||:|.|.|||||:|||.||..|||:..|||:|||||||||||.|||:||.||||:   |..|
Human   142 AYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKK 206

  Fly   204 KTDEAA-KSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLL 267
            |.:.|: |.:|:||||::..||:|||||||||||||||||||||||||||.|||||.||||||||
Human   207 KEEPASGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLL 271

  Fly   268 EKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTD 332
            ||:||..|...||||||||||:|...|.:.::.|:|.|.||:..||||::||.||||.||...||
Human   272 EKSRVTFQLKAERSYHIFYQILSNKKPELIEMLLITTNPYDFAFVSQGEITVPSIDDQEELMATD 336

  Fly   333 QAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKN 397
            .|.||||||..||..:|::|.||||.|.|||||:.||||||.||.|...:.:.|...::|:|.|:
Human   337 SAVDILGFTADEKVAIYKLTGAVMHYGNMKFKQKQREEQAEPDGTEVADKAAYLTSLNSADLLKS 401

  Fly   398 LLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIA 462
            |..||:||||||||:|:.||||.|::|||.|.:::::|.|:|.:.|:.|||:|.||:||||||||
Human   402 LCYPRVKVGNEFVTKGQTVQQVYNAVGALAKAIYEKMFLWMVTRINQQLDTKQPRQYFIGVLDIA 466

  Fly   463 GFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPM 527
            |||||::|..|||||||||||||||||||||||||||||:|||:|.||||||||.|||:||||||
Human   467 GFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPM 531

  Fly   528 GILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITG 592
            ||.||||||.|||||||.:|..||...|||||..||||||.| |:..|||::.||||.|.|||.|
Human   532 GIFSILEEECMFPKATDTSFKNKLYEQHLGKSNNFQKPKPAK-GKPEAHFSLVHYAGTVDYNIAG 595

  Fly   593 WLEKNKDPLNDTVVDQFKKSQNKLLIEIF--ADHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQ 655
            ||:|||||||:|||..::||..|.|..:|  |..|...|||.: |||: |||..|.|||:.::|.
Human   596 WLDKNKDPLNETVVGLYQKSAMKTLAFLFSGAQTAEAEGGGGK-KGGK-KKGSSFQTVSALFREN 658

  Fly   656 LNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFK 720
            ||.|||.||||.|||||||||||.|.||.::..||:|||.||||||||||||||||:|::|.|||
Human   659 LNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRILYADFK 723

  Fly   721 MRYKIMCPKLL---QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGK 782
            .|||::....:   |.:: .|||:|.::..|::...||:.|:|||||:||:||.:||.|||:|.:
Human   724 QRYKVLNASAIPEGQFID-SKKASEKLLGSIEIDHTQYKFGHTKVFFKAGLLGTLEEMRDEKLAQ 787

  Fly   783 IMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDE 847
            :::..||..||:|.|..|:|:.|:|.::..:|.|:|.::.::.|||.||:.|:||||..:..|.|
Human   788 LITRTQAICRGFLMRVEFRKMMERRESIFCIQYNIRAFMNVKHWPWMKLYFKIKPLLKSAETEKE 852

  Fly   848 IARLEEKAKKA-EELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQERNAKLTAQK 911
            :|.::|:.:|. |||...|.| |||||.....|:.||..|...:..|..||.|.:||..:|...|
Human   853 MANMKEEFEKTKEELAKTEAK-RKELEEKMVTLMQEKNDLQLQVQAEADALADAEERCDQLIKTK 916

  Fly   912 NDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRN 976
            ..||.:::::.||...||:...:|..:|:|.:.|.|.|||||:||||.:.|.|::|...:::::|
Human   917 IQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKN 981

  Fly   977 LNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREK 1041
            |.:|:|..||.|.||.||||...|.:|:|.::||..|||:|.|.|.|.||||.:|:||.|||:||
Human   982 LTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQMEEDKVNTLTKAKTKLEQQVDDLEGSLEQEK 1046

  Fly  1042 KVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLEDEQVVVLKHQRQ 1106
            |:..|:|::|||:||||||.||:..|.|.:|::|.:.:::|:.|:|::..|:||||.:.::.|::
Human  1047 KLCMDLERAKRKLEGDLKLAQESTMDTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQLQKK 1111

  Fly  1107 IKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELS 1171
            ||||||||||||||:||||.:||||||||:||:|||||:.|||||||||||||||:|||||||..
Human  1112 IKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQ 1176

  Fly  1172 KLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDH 1236
            |:||||||:.:|||:|.|.|||||.|:|||:.||:|.|.::|.|.||||:|...::|||.:.::.
Human  1177 KMRRDLEESTLQHEATAAALRKKHADSVAELGEQIDSLQRVKQKLEKEKSELKMEINDLASNMET 1241

  Fly  1237 ITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLS 1301
            ::..||..||:.:.|:..|:|:::|.:|..|.:|:..|.|.:|..|:.:..|||:|.::.|||||
Human  1242 VSKAKANFEKMCRTLEDQLSEIKTKEEEQQRLINELSAQKARLHTESGEFSRQLDEKDAMVSQLS 1306

  Fly  1302 KIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAE 1366
            :.|.:.|.|:|:.||..:||::.::||....::..||.|.||||.|||.|.||:|||.:||||:|
Human  1307 RGKQAFTQQIEELKRQLEEETKAKSTLAHALQSARHDCDLLREQYEEEQEAKAELQRGMSKANSE 1371

  Fly  1367 AQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEV 1431
            ...||:|||:|.:.|:|||||||:||..||.:|||.:|::|.||..||||||||..|||||.::|
Human  1372 VAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNEVEDLMIDV 1436

  Fly  1432 DRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEA 1496
            :|:||...|.:|||:.|||::.|||.|.::..|||:|||||.|:.|||||::|.||||..:.||.
Human  1437 ERSNAACIALDKKQRNFDKVLAEWKQKYEETQAELEASQKESRSLSTELFKVKNAYEESLDHLET 1501

  Fly  1497 VRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQ 1561
            ::||||||..|:.||.:||.|||::|||:||.:|:|:.||.|||.:||||||:||.||.|:||.|
Human  1502 LKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSELQTSLEEAEASLEHEEGKILRIQ 1566

  Fly  1562 LELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEI 1626
            |||:||:.||||:|.||:||.:..::||.|.::|||::|:||.:.:.:|||:|||:|.|:||:||
Human  1567 LELNQVKSEIDRKIAEKDEELDQLKRNHLRVVESMQSTLDAEIRSRNDALRIKKKMEGDLNEMEI 1631

  Fly  1627 ALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESRTLL 1691
            .|:|||:..|||.:|::..|..|||.|..|::..|.:||.:|||.:.|||||.:|.|:||.|..|
Human  1632 QLNHANRQAAEALRNLRNTQGILKDTQLHLDDAIRGQDDLKEQLAMVERRANLMQAEVEELRASL 1696

  Fly  1692 EQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKK 1756
            |:.:|||:.|||||.||.|::..:..||.|:...|:|||:::..:..::::::.||:|:||||||
Human  1697 ERTERGRKMAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAKK 1761

  Fly  1757 AMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVREL 1821
            |:.|||.:|:||:.|||.:...|:::|.:||.:|:||:||||||..|||||||.|||||.|||||
Human  1762 AITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRLDEAEQLALKGGKKQIQKLEARVREL 1826

  Fly  1822 ENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEE 1886
            |:|::.||:.:.:|.|.|||.|||||||::|:||||||..|:||||||||.|:|.||||.|||||
Human  1827 ESEVESEQKHNVEAVKGLRKHERRVKELTYQTEEDRKNILRLQDLVDKLQTKVKAYKRQAEEAEE 1891

  Fly  1887 IAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGR 1924
            .:.:|||||||.|.|||||:||||:||..::|.|.|.|
Human  1892 QSNVNLAKFRKLQHELEEAKERADIAESQVNKLRVKSR 1929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 8/36 (22%)
MYSc 81..777 CDD:214580 445/704 (63%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 425/673 (63%)
Myosin_tail_1 842..1897 CDD:279860 555/1055 (53%)
V_Alix_like 1557..1877 CDD:187408 171/319 (54%)
ATP-synt_B <1671..1771 CDD:304375 46/99 (46%)
TMPIT 1739..>1825 CDD:285135 50/85 (59%)
MYH4NP_060003.2 Myosin_N 36..73 CDD:280832 8/36 (22%)
Myosin_head 88..770 CDD:278492 433/685 (63%)
MYSc_Myh4 100..770 CDD:276879 425/673 (63%)
Actin-binding. /evidence=ECO:0000250 659..681 18/21 (86%)
Actin-binding. /evidence=ECO:0000250 761..775 8/13 (62%)
Myosin_tail_1 850..1927 CDD:279860 571/1077 (53%)
RILP-like 965..1098 CDD:304877 61/132 (46%)
MIT_CorA-like <1299..>1411 CDD:294313 58/111 (52%)
COG6 1376..>1511 CDD:303003 79/134 (59%)
DUF342 <1670..1767 CDD:302792 45/96 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 1116 1.000 Domainoid score I20
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 2097 1.000 Inparanoid score I44
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D41153at33208
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm41736
orthoMCL 1 0.900 - - OOG6_100110
Panther 1 1.100 - - O PTHR45615
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2660
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.900

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