Sequence 1: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001188730.1 | Gene: | d / 34179 | FlyBaseID: | FBgn0262029 | Length: | 1426 | Species: | Drosophila melanogaster |
Alignment Length: | 1059 | Identity: | 264/1059 - (24%) |
---|---|---|---|
Similarity: | 415/1059 - (39%) | Gaps: | 246/1059 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 74 SEKVEKV--------NPPKFEKIEDMADMTVLNTP----CVLHNLRQRYYAKLIYTYSGLFCVAI 126
Fly 127 NPYKRY--PVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENT 189
Fly 190 KKVI-AYFATVGASKKTDEAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGP 253
Fly 254 TGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHI------- 311
Fly 312 --VSQGKVTVASIDDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQ 374
Fly 375 DGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQ-QVTNSI----------GALCK 428
Fly 429 GVFDRLFKWLVKKCN------ETLDTQQK-------------RQH-------------------- 454
Fly 455 --------FIGVLDIAGF-EIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGI--DWA 508
Fly 509 FIDFGMDLLACIDLIEK-PMGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQ 572
Fly 573 QAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKK-------------SQNKLLIEIFA-- 622
Fly 623 -------------DHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCI 674
Fly 675 IPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMCPKLLQGVEKDK- 738
Fly 739 -KATEIIIKF-IDLP---EDQYRL----GNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARGY 794
Fly 795 LSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLEEKAKKAE 859
Fly 860 ELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQERNAKLTAQKNDLENQLRDIQER 924
Fly 925 LTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELIN 989
Fly 990 KLNKEKKMQGETNQ-KTGE 1007 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | |
MYSc | 81..777 | CDD:214580 | 214/811 (26%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 206/780 (26%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 32/167 (19%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | |||
ATP-synt_B | <1671..1771 | CDD:304375 | |||
TMPIT | 1739..>1825 | CDD:285135 | |||
d | NP_001188730.1 | MYSc | 476..1217 | CDD:214580 | 210/799 (26%) |
MYSc_Myo20 | 488..1206 | CDD:276847 | 205/776 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45466233 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.930 |