Sequence 1: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006243475.1 | Gene: | Myo5c / 315820 | RGDID: | 1309994 | Length: | 1749 | Species: | Rattus norvegicus |
Alignment Length: | 1505 | Identity: | 433/1505 - (28%) |
---|---|---|---|
Similarity: | 718/1505 - (47%) | Gaps: | 243/1505 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 YDSKKSCWIPDEKEGYLLGEIKA--TKGD-IVSVGLQGGEVRDIKSEKVEKVNPPKFEKI----- 88
Fly 89 ----EDMADMTVLNTPCVLHNLRQRY-YAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRR 148
Fly 149 NEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKG 213
Fly 214 SLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSL 278
Fly 279 ERSYHIFYQI-MSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFTK 342
Fly 343 QEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGN 407
Fly 408 EFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYNGF 472
Fly 473 EQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILEEES 537
Fly 538 MFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPLN 602
Fly 603 DTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSA---------------- 651
Fly 652 --YKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRM 714
Fly 715 MYPDFKMRYKIMCPKLLQGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDER 779
Fly 780 LGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRI 844
Fly 845 EDEIAR--LEEKAK------KAEELHAAEVKVRKELEALNA-----KLLAEKTALLDSLSGEKGA 896
Fly 897 LQDYQER---------------NAKLTAQKNDLENQLRD-------IQERLTQEEDARNQLFQQK 939
Fly 940 KKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQK 1004
Fly 1005 TGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKS----KRKVEGDLKLTQEAV 1065
Fly 1066 ADLERNKKELEQTIQR---KDKELSSITAKLEDEQVVVLKHQRQIKELQARIEELEEEVEAERQA 1127
Fly 1128 RAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLR-RDLEEANIQHESTLA-- 1189
Fly 1190 NLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQ---L 1251
Fly 1252 QHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKR 1316
Fly 1317 LADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDG--- 1378
Fly 1379 -VARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAE 1442
Fly 1443 KKQKAFDKII 1452 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 12/39 (31%) |
MYSc | 81..777 | CDD:214580 | 269/724 (37%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 261/684 (38%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 133/663 (20%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | |||
ATP-synt_B | <1671..1771 | CDD:304375 | |||
TMPIT | 1739..>1825 | CDD:285135 | |||
Myo5c | XP_006243475.1 | Myosin_N | 12..48 | CDD:280832 | 11/35 (31%) |
MYSc | 62..752 | CDD:214580 | 268/714 (38%) | ||
MYSc_Myo5 | 81..741 | CDD:276831 | 261/684 (38%) | ||
IQ | 755..776 | CDD:197470 | 7/20 (35%) | ||
IQ | 830..851 | CDD:197470 | 2/20 (10%) | ||
COG1340 | 890..1150 | CDD:224259 | 60/312 (19%) | ||
GBP_C | <929..1030 | CDD:303769 | 23/109 (21%) | ||
RILP-like | <977..1096 | CDD:304877 | 25/124 (20%) | ||
coiled coil | 1001..1010 | CDD:293879 | 2/8 (25%) | ||
coiled coil | 1019..1030 | CDD:293879 | 1/10 (10%) | ||
Myo5c_CBD | 1376..1743 | CDD:271260 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |