Sequence 1: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006249639.1 | Gene: | Myo18b / 304551 | RGDID: | 1594542 | Length: | 2551 | Species: | Rattus norvegicus |
Alignment Length: | 2146 | Identity: | 478/2146 - (22%) |
---|---|---|---|
Similarity: | 911/2146 - (42%) | Gaps: | 487/2146 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 PKPVANQEDEDPT----PYLFVSLEQRRI-------------DQS---KPYDSKKSCWIPDEKEG 46
Fly 47 YLLGEIKATKGDIVSVGLQGGEVR----------DIKSEKVEKVNPPKFEKIEDMADMTVLNTPC 101
Fly 102 VLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDM 166
Fly 167 LTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQTNPVLEAFGN 231
Fly 232 AKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGV 296
Fly 297 KDICLLTDNIYDYHIVSQ----GKVTVASIDD----AEEFSLTDQAFDILGFTKQEKEDVYRITA 353
Fly 354 AVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQ 418
Fly 419 VTNS-------------IGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYN 470
Fly 471 G------FEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDL--------LACID 521
Fly 522 L------------IEKPMGILSILEEESMFPKATDQTFSEKLTNTHLG---KSAPFQKPKPPKPG 571
Fly 572 QQAAHFAIAHYAG--CVSYNITGWLEKNKDPLN----DTVVDQFKKSQNKLLIEIFAD------- 623
Fly 624 HAGQSGGGEQAKGGRGK-KGGGFATVSSAYKE---------QLNSLMTTLRSTQPHFVRCIIPNE 678
Fly 679 MK-----------QPG----------VVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMR 722
Fly 723 YKIMCPKLLQGVE------KDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLG 781
Fly 782 KIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLN------ 840
Fly 841 -VSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDS-LSGEKGALQDYQER 903
Fly 904 NAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAE-QDK 967
Fly 968 AT---KDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQT 1029
Fly 1030 LDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLE 1094
Fly 1095 DEQVVVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQ 1159
Fly 1160 IELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYY 1224
Fly 1225 GQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQ 1289
Fly 1290 LEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQV-EEEAEGK 1353
Fly 1354 ADLQRQLSKANA---EAQVWRSKYESDGVARS-EELEEAKRKLQARLAEAEETIESLNQKCIGLE 1414
Fly 1415 KTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVD--DLAAELDASQKECRNYS 1477
Fly 1478 TELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAA 1542
Fly 1543 LEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASL--EAEAK 1605
Fly 1606 GKAEALRMKK------KLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARD 1664
Fly 1665 DAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNA--------- 1720
Fly 1721 -----------SISAAKRKLESELQTLHSDLDELLNEAKN--SEEKAKKAMVDAARLADELRAEQ 1772
Fly 1773 DHAQTQEKLRKALEQQIKELQVRLDEAEANALK------------GGKKAIQKLEQRVRELENEL 1825
Fly 1826 DGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAAL 1890
Fly 1891 NLA--------------KFRKAQQELEEAEERADLAEQAISKFRAKGRAGSVGRGASPAPRATSV 1941
Fly 1942 R 1942 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 10/46 (22%) |
MYSc | 81..777 | CDD:214580 | 207/795 (26%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 197/764 (26%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 212/1122 (19%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 67/361 (19%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 20/121 (17%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 14/99 (14%) | ||
Myo18b | XP_006249639.1 | MYSc | 558..1324 | CDD:214580 | 207/795 (26%) |
MYSc_Myo18 | 577..1312 | CDD:276837 | 197/764 (26%) | ||
KASH_CCD | 1390..1579 | CDD:291334 | 48/229 (21%) | ||
GBP_C | <1683..1766 | CDD:303769 | 20/123 (16%) | ||
coiled coil | 1737..1751 | CDD:293879 | 2/13 (15%) | ||
Rab5-bind | 1788..2082 | CDD:286404 | 79/379 (21%) | ||
DUF3585 | <1889..2033 | CDD:304905 | 44/181 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0161 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |