Sequence 1: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_008770307.1 | Gene: | Myo5b / 25132 | RGDID: | 621347 | Length: | 1854 | Species: | Rattus norvegicus |
Alignment Length: | 2043 | Identity: | 552/2043 - (27%) |
---|---|---|---|
Similarity: | 902/2043 - (44%) | Gaps: | 435/2043 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 WIPDEKEGYLLGEIKATK----GD-IVSVGLQGGEVR----DIKSEKVEKV-NPPKFEKIEDMAD 93
Fly 94 MTVLNTPCVLHNLRQRYY-AKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFA 157
Fly 158 ISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQVVQT 222
Fly 223 NPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQ 287
Fly 288 I-MSGSVPGVKDICL--LTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFTKQEKEDVY 349
Fly 350 RITAAVMHMGGMKFKQRGREEQAEQDG--------EEEGGRVSKLFGCDTAELYKNLLKPRIKVG 406
Fly 407 NEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYNG 471
Fly 472 FEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILEEE 536
Fly 537 SMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPL 601
Fly 602 NDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKGGRG-------------------KKGGGFAT 647
Fly 648 VSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPN 712
Fly 713 RMMYPDFKMRYKIMCPKLLQGVEKDKK-----ATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQM 772
Fly 773 EEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYK------L 831
Fly 832 WQKVKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGA 896
Fly 897 LQDYQ-ERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNV 960
Fly 961 QKAEQDKATKDHQIRNLNDEIA-----HQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLN 1020
Fly 1021 KVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLER-------NKKELEQT 1078
Fly 1079 IQRKDKELSS---------ITAKLEDEQVVVLKHQRQIKE---LQARIEELEEEVEA-------E 1124
Fly 1125 RQARAKAEK-----------QRADLARELEELGERLEEAGGATSAQIELNKK---REAELSKLRR 1175
Fly 1176 DLEEANIQHESTLANLRKKHN----DAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDH 1236
Fly 1237 ITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLS 1301
Fly 1302 KIKISLTTQL--EDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKAN 1364
Fly 1365 AEAQVWRSKYESDGVARSEELEEAKRKLQ--ARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDL 1427
Fly 1428 QLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQE 1492
Fly 1493 QLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKV 1557
Fly 1558 LRAQLELSQVRQEIDRR---------IQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRM 1613
Fly 1614 KKKLEADINE--------------LEIALDHANKANAE-------------AQKNIKRYQQQLKD 1651
Fly 1652 IQTALEE--------EQRARDDAREQLGISERRANALQN-ELEESRTLLEQADRGRRQAEQELAD 1707
Fly 1708 AHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKKAMVDA--ARLADELRA 1770
Fly 1771 EQDHAQT----QEKLRKALEQQIKELQVRLDEAEANALKGGKKAI-----QKLEQRVRELENELD 1826
Fly 1827 GEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAAL- 1890
Fly 1891 ------NLAKFRKAQQELEEAEERADLA 1912 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 12/42 (29%) |
MYSc | 81..777 | CDD:214580 | 285/731 (39%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 276/700 (39%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 231/1171 (20%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 68/375 (18%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 22/102 (22%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 17/96 (18%) | ||
Myo5b | XP_008770307.1 | MYSc | 72..770 | CDD:214580 | 285/730 (39%) |
MYSc_Myo5 | 91..759 | CDD:276831 | 276/700 (39%) | ||
IQ | 871..891 | CDD:197470 | 2/19 (11%) | ||
DUF1690 | 910..1002 | CDD:285231 | 22/122 (18%) | ||
Rab5-bind | 919..1179 | CDD:286404 | 64/300 (21%) | ||
RILP-like | <979..1069 | CDD:304877 | 24/107 (22%) | ||
Uso1_p115_C | 1155..1267 | CDD:282695 | 31/131 (24%) | ||
GBP_C | <1340..1416 | CDD:303769 | 27/120 (23%) | ||
coiled coil | 1385..1396 | CDD:293879 | 4/37 (11%) | ||
coiled coil | 1405..1416 | CDD:293879 | 4/12 (33%) | ||
Myo5b_CBD | 1480..1851 | CDD:271261 | 69/377 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |