Sequence 1: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006510998.1 | Gene: | Myo5c / 208943 | MGIID: | 2442485 | Length: | 1749 | Species: | Mus musculus |
Alignment Length: | 2022 | Identity: | 523/2022 - (25%) |
---|---|---|---|
Similarity: | 849/2022 - (41%) | Gaps: | 480/2022 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 32 YDSKKSCWIPDEKEGYLLGEIKA--TKGD-IVSVGLQGGEVRDIKSEKVEKVNPPKFEKI----- 88
Fly 89 ----EDMADMTVLNTPCVLHNLRQRY-YAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRR 148
Fly 149 NEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKG 213
Fly 214 SLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSL 278
Fly 279 ERSYHIFYQI-MSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFTK 342
Fly 343 QEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGN 407
Fly 408 EFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYNGF 472
Fly 473 EQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILEEES 537
Fly 538 MFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPLN 602
Fly 603 DTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSA---------------- 651
Fly 652 --YKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRM 714
Fly 715 MYPDFKMRYKIMCPKLLQGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDER 779
Fly 780 LGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRI 844
Fly 845 EDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQE------- 902
Fly 903 ----RNAKLTAQKNDLENQLRDIQERLTQEEDA-RNQLFQQKKKADQEISGLKKDIEDLELNVQK 962
Fly 963 AEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQA-AEDKINHLNKVKAKL 1026
Fly 1027 EQTLDELEDSLEREKKVRGDVEKSKRK----VEGDLKLTQEAVADLERNKKELEQTIQRKDKELS 1087
Fly 1088 SITAKL----------EDEQVVVLKHQRQIK--ELQARIEELEEEVEAERQARAKAEKQRADLAR 1140
Fly 1141 ELEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQ 1205
Fly 1206 VDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLN 1270
Fly 1271 DFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNL 1335
Fly 1336 EHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAE 1400
Fly 1401 ETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAE 1465
Fly 1466 LDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARK 1530
Fly 1531 RLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEID------RRIQEKEEEFENT--RK 1587
Fly 1588 NHQRALDSMQASL-----EAEAKGK-----------------------AEALRMKKKLEADINEL 1624
Fly 1625 EIALDHANKANAEAQKNIKRYQQQLKDIQTALEE--------EQRARDDAREQLGISERRANALQ 1681
Fly 1682 N-ELEESRTLLEQADRGRRQAEQELADAHEQLNEV---------SAQNASISAAK----RKLESE 1732
Fly 1733 LQ-----TLHSDLDEL------LNEAKNSEEKAKKA------MVDAARLADELRAEQDHAQTQEK 1780
Fly 1781 LRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERR 1845
Fly 1846 VKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIA-------ALNLAKFRKAQQELE 1903
Fly 1904 EAEERAD 1910 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 11/39 (28%) |
MYSc | 81..777 | CDD:214580 | 269/724 (37%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 261/684 (38%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 223/1165 (19%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 69/394 (18%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 29/130 (22%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 14/97 (14%) | ||
Myo5c | XP_006510998.1 | MYSc_Myo5 | 81..741 | CDD:276831 | 261/684 (38%) |
DUF3584 | <767..>1043 | CDD:378817 | 79/375 (21%) | ||
SMC_prok_A | <922..1276 | CDD:274009 | 97/462 (21%) | ||
ERM | 1220..>1354 | CDD:366293 | 46/209 (22%) | ||
Myo5c_CBD | 1376..1743 | CDD:271260 | 66/377 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |