DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhc and LOC100495802

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_031747898.1 Gene:LOC100495802 / 100495802 -ID:- Length:1937 Species:Xenopus tropicalis


Alignment Length:1924 Identity:1072/1924 - (55%)
Similarity:1429/1924 - (74%) Gaps:19/1924 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 YLFVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRDIKSEKVEKV 80
            ||..|.::|...||||:|:|.:.::.|.||.|:.|.:.|.:...|:|....|....:|..::...
 Frog    15 YLRKSEKERIEAQSKPFDAKNTVFVDDAKELYVKGMVTAREDGKVTVKTDAGNNVTVKDSQIYPQ 79

  Fly    81 NPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRG 145
            ||||::||||||.||.||...||:||::||.|.:||||||||||.:||||..|||.......|||
 Frog    80 NPPKYDKIEDMAMMTHLNEASVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPEVVAGYRG 144

  Fly   146 KRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGA----SKKTD 206
            |:|.|.|||||:|||.||..|||:..|||:|||||||||||.|||:||.||||:.|    .||.:
 Frog   145 KKRVEAPPHIFSISDNAYQAMLTDRENQSVLITGESGAGKTVNTKRVIQYFATIAAIGDSGKKKE 209

  Fly   207 EAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKAR 271
            .:...:|:||||::|.||:|||||||||||||||||||||||||||.||||:.||||||||||:|
 Frog   210 PSNSLQGTLEDQIIQANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLSSADIETYLLEKSR 274

  Fly   272 VISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFD 336
            |..|.|.|||||||||:|:...|.:.::||:|.|.||:..:|||::.|.||||.||...||.|.|
 Frog   275 VTFQLSAERSYHIFYQMMTNKKPEIIEMCLITTNPYDFPFISQGEIVVKSIDDQEELMATDSAID 339

  Fly   337 ILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKP 401
            ||||.:.||..:|::|.||||...|||||:.||||||.||.|:..:::.|.|.::|:|.|.|..|
 Frog   340 ILGFNQDEKVGIYKLTGAVMHHSNMKFKQKQREEQAEPDGTEDADKIAYLMGLNSADLLKALCYP 404

  Fly   402 RIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEI 466
            |:||||||||:|:.|.||.|::|||||.|:::||.|:|.:.|:.|||:|.||.||||||||||||
 Frog   405 RVKVGNEFVTKGQTVGQVNNAVGALCKSVYEKLFLWMVTRINQQLDTKQPRQFFIGVLDIAGFEI 469

  Fly   467 FEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILS 531
            |::|..|||||||||||||||||||||||||||||:|||||.||||||||.|||:||||||||.|
 Frog   470 FDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIDWEFIDFGMDLAACIELIEKPMGIFS 534

  Fly   532 ILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEK 596
            |||||.|||||||.:|..||...||||...|:||||.| |:..|||::.||||.|.|||:|||:|
 Frog   535 ILEEECMFPKATDTSFKNKLYEQHLGKCKNFEKPKPGK-GKAEAHFSLGHYAGTVDYNISGWLDK 598

  Fly   597 NKDPLNDTVVDQFKKSQNKLLIEIFADHA---GQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNS 658
            ||||||::||..::||..|||..:::.:|   ..:||    |||:.|||..|.|||:.::|.||.
 Frog   599 NKDPLNESVVQLYQKSSVKLLSFLYSSYAAADADAGG----KGGKKKKGSSFQTVSALFRENLNK 659

  Fly   659 LMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRY 723
            |||.||||.||||||:||||.|.||:::.||::|||.||||||||||||||||:|::|.|||.||
 Frog   660 LMTNLRSTHPHFVRCLIPNESKTPGIMENHLIIHQLRCNGVLEGIRICRKGFPSRILYGDFKQRY 724

  Fly   724 KIMCPKLL---QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMS 785
            |::....:   |.:: .|||:|.::..||:...||:.|:|||||:||:||.:||.|||:|.::::
 Frog   725 KVLNASAIPDGQFID-SKKASEKLLGSIDVDHTQYKFGHTKVFFKAGLLGTLEEMRDEKLAQLIT 788

  Fly   786 WMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIAR 850
            ..||..||:|.|..||::.|:|.::..:|.|||.::.::.|||.||:.|:||||..:..|.|:..
 Frog   789 RTQALCRGFLMRVEFKQMMERRESIYTIQYNLRSFMNVKHWPWMKLYFKIKPLLKSAETEKEMQN 853

  Fly   851 LEEKAKKAEE-LHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQERNAKLTAQKNDL 914
            ::|:.:|.:: |..||.| :||||.....||.||..|...:..|...|.|.:||...|...|..|
 Frog   854 MKEEFEKTKDALAKAEAK-KKELEEKMVVLLQEKNDLSLQVQTESETLADSEERCEGLIKVKIQL 917

  Fly   915 ENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLND 979
            |:::::|.|||..||::..:|..:|:|.:.|.|.|||||:||||.:.|.|::|...:::::||.:
 Frog   918 ESKIKEITERLEDEEESNAELTAKKRKLEDETSELKKDIDDLELTLAKVEKEKHATENKVKNLTE 982

  Fly   980 EIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVR 1044
            |:|..||.|:||.||||...|.:|:|.::|||.|||::.|.|.|.||||.:|:||.|||:|||:|
 Frog   983 EMAVLDENISKLTKEKKALQEAHQQTLDDLQAEEDKVSSLTKAKTKLEQQVDDLEGSLEQEKKLR 1047

  Fly  1045 GDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLEDEQVVVLKHQRQIKE 1109
            .|:|::|||:||||||:||.|.|||.:|::.|:.:::||.|:|.:..|:||||.:..:.|::|||
 Frog  1048 LDLERAKRKLEGDLKLSQETVMDLENDKQQTEEKLKKKDFEISQLQGKIEDEQTLGTQLQKKIKE 1112

  Fly  1110 LQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLR 1174
            |||||||||||:||||.||||.|||||||:|||||:.|||||||||||||||:|||||||..|:|
 Frog  1113 LQARIEELEEEIEAERAARAKIEKQRADLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKVR 1177

  Fly  1175 RDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITN 1239
            ||||||.:|||:|...|||||.|:|||:.||:|.|.::|.|.||||:|...:::||.:.:::::.
 Frog  1178 RDLEEATLQHEATAGALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNLENVSK 1242

  Fly  1240 EKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIK 1304
            .||..||:.:.::..|:||:||.||..|.:||..|.:.:...||.:|.||:||.||.:||||:.|
 Frog  1243 AKANLEKVNRVIEDQLSEVKSKGDEQQRLVNDLGAQRARFQTENGELSRQVEEKESLISQLSRGK 1307

  Fly  1305 ISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQV 1369
            ...|.|:|:.||..:|||:.:..|....::..||.|.||||.|||.|.||:|||.|||||.|...
 Frog  1308 QGFTQQIEELKRQLEEESKAKNALAHALQSARHDSDLLREQYEEEQEAKAELQRSLSKANGEVAQ 1372

  Fly  1370 WRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRA 1434
            ||:|||:|.:.|:|||||||:||..||.||||.:|::|.||..|:||||||.:|||||.::|:||
 Frog  1373 WRTKYETDAIQRTEELEEAKKKLAQRLQEAEEQVEAVNSKCASLDKTKQRLQSEVEDLMVDVERA 1437

  Fly  1435 NAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRR 1499
            |:.|.|.:|||:.|||::.|||.|.::..|||:|:.||.|:.|||:|::|.||||..|.:|.::|
 Frog  1438 NSAAAALDKKQRNFDKVLSEWKQKYEEGQAELEAALKEARSQSTEIFKVKNAYEESLEHVETLKR 1502

  Fly  1500 ENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLEL 1564
            |||||..|:.||.:||||.|::|:|:|||:|::|.||.:|||||||||.:||.||.|:||.||||
 Frog  1503 ENKNLQQEISDLTEQIGETGKSINELEKAKKQVEQEKSDLQAALEEAEGSLEHEEAKILRIQLEL 1567

  Fly  1565 SQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALD 1629
            :||:.|:||:|.||:||.|..::|.|||:|::|::|::|.:.:.:|||:|||:|.|:|||||.|.
 Frog  1568 NQVKSEVDRKIAEKDEENEQLKRNSQRAIDTIQSTLDSEIRSRNDALRLKKKMEGDLNELEIQLS 1632

  Fly  1630 HANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQA 1694
            |||:...||||.::..|.|.||.|..|::..|.:||.:||:.:.|||.|..|.|:||:|..|||.
 Frog  1633 HANRQAGEAQKQLRNVQAQYKDAQLQLDDAVRGQDDLKEQVAVIERRNNLQQAEIEENRAALEQT 1697

  Fly  1695 DRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKKAMV 1759
            :|.|:.|||||.||.|::..:.:||.|:..:|:|||::|..|.::::|.:.||:|:|||||||:.
 Frog  1698 ERSRKIAEQELLDASERVQLLHSQNTSLIGSKKKLEADLSQLQNEVEEAVQEARNAEEKAKKAIT 1762

  Fly  1760 DAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENE 1824
            |||.:|:||:.|||.:...|:::|.|||.:|:||.||||||..|:|||||.:||||.||||||||
 Frog  1763 DAALMAEELKKEQDTSAHLERMKKNLEQTVKDLQNRLDEAEQLAMKGGKKQLQKLESRVRELENE 1827

  Fly  1825 LDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAA 1889
            ||.||:|..||.|.:||.|||||||::|:||||||..|:||||||||.|:|.||||.||:||.|.
 Frog  1828 LDNEQKRGVDAVKGVRKYERRVKELTYQTEEDRKNVLRLQDLVDKLQLKVKAYKRQAEESEEQAT 1892

  Fly  1890 LNLAKFRKAQQELEEAEERADLAEQAISKFRAKGR-AGS 1927
            .:|::|||.|.||||||||||:||..::|.|||.| |||
 Frog  1893 THLSRFRKVQHELEEAEERADIAESQVNKLRAKSRDAGS 1931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 9/36 (25%)
MYSc 81..777 CDD:214580 439/705 (62%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 418/674 (62%)
Myosin_tail_1 842..1897 CDD:279860 562/1055 (53%)
V_Alix_like 1557..1877 CDD:187408 175/319 (55%)
ATP-synt_B <1671..1771 CDD:304375 48/99 (48%)
TMPIT 1739..>1825 CDD:285135 51/85 (60%)
LOC100495802XP_031747898.1 Myosin_N 34..72 CDD:397036 10/37 (27%)
MYSc_class_II 99..768 CDD:276951 418/674 (62%)
Myosin_tail_1 848..1925 CDD:396244 579/1077 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D41153at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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