DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhc and LOC100493774

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_004916275.2 Gene:LOC100493774 / 100493774 -ID:- Length:1989 Species:Xenopus tropicalis


Alignment Length:1957 Identity:774/1957 - (39%)
Similarity:1191/1957 - (60%) Gaps:67/1957 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NQEDEDPTPYLFVSLEQRRIDQSK-PYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL-QGGEV 69
            |...:|...||||......:..:: .:.:|:..|:|.||.|:....||..:|:.|.|.| :.|:.
 Frog     4 NSYRDDAERYLFVDRNPTSVTATQADWTAKRQVWVPSEKHGFEAASIKEERGEEVIVELAENGKR 68

  Fly    70 RDIKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPV 134
            ..:..:.::|:|||||.|:||||::|.||...|||||:.|||:.|||||||||||.|||||..|:
 Frog    69 VPVAKDDIQKMNPPKFTKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKNLPI 133

  Fly   135 YTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATV 199
            ||.:..:|||||:|:|:||||:|||:.||..||.:..:||:|.||||||||||||||||.|.|.|
 Frog   134 YTEQIVEMYRGKKRHEIPPHIYAISETAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHV 198

  Fly   200 GASKK--TDEAAKSK-----GSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKL 257
            .:|.|  .:..|.|.     |.||.|::|.||:||||||||||:|||||||||||||:|...|.:
 Frog   199 ASSHKGRKEHTAPSSSNTFYGELEHQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYI 263

  Fly   258 AGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASI 322
            .||:||||||||:|.|.|...||::|:|||:::|:...:| ..||.:....|..:|.|.:.:...
 Frog   264 VGANIETYLLEKSRAIRQAKDERTFHVFYQLLAGAGEHMK-TDLLLEGFNQYRFLSNGNLPIPGQ 327

  Fly   323 DDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLF 387
            .|.|.|..|.::..|:||..:|...:.::.:||:..|.:.|::....:||.........::..|.
 Frog   328 QDREIFQETMESMKIMGFNHEEIMSMLKMVSAVLQFGNIVFRKERNTDQASMPDNTAAQKLCHLL 392

  Fly   388 GCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLD-TQQK 451
            |.:..|..:.:|.||||||.::|.:.:..:|...::.||.|.:::|||:|||.:.|:.|| |:::
 Frog   393 GLNVTEFSRAILMPRIKVGRDYVQKAQTKEQADFAVEALAKALYERLFRWLVHRINKALDRTKRQ 457

  Fly   452 RQHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDL 516
            ...|||:||||||||||.|.|||||||:|||||||.|||.|||||||||:||||:|.|||||:||
 Frog   458 GASFIGILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIEWNFIDFGLDL 522

  Fly   517 LACIDLIEKPM---GILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFA 578
            ..||||||:|.   |:||:|:||..||||||::|.||:.. .||....||||:..:   ..|...
 Frog   523 QPCIDLIERPANPPGVLSLLDEECWFPKATDKSFVEKVIQ-ELGNHPKFQKPRQLR---DKADLC 583

  Fly   579 IAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFAD---HAG---QSGGGEQAKGG 637
            |.||||.|.|....||.||.|||||.|.....:|.:|...|::.|   ..|   .||.||.:.|.
 Frog   584 IIHYAGKVDYKADEWLMKNMDPLNDNVATLLHQSTDKYTAELWKDVDRIVGLDQVSGMGEMSFGS 648

  Fly   638 RGK-KGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLE 701
            ..| |.|.|.||...|||.|:.||:|||:|.|:||||||||..|:.|.::.|||:.||.||||||
 Frog   649 SYKTKKGMFRTVGQLYKESLSKLMSTLRNTNPNFVRCIIPNHEKKAGKLEPHLVLDQLRCNGVLE 713

  Fly   702 GIRICRKGFPNRMMYPDFKMRYKIMCPKLL-QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFR 765
            ||||||:|||||:::.:|:.||:|:.|..: :|....|:|..|:|:.::|..:.||:|.:|:|||
 Frog   714 GIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGKQACAIMIRALELDPNLYRIGQSKIFFR 778

  Fly   766 AGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYK 830
            ||||..:||.||.::..|:.:.||.|||||:|:.|.|.|:|..||||||||...||:||.|.|::
 Frog   779 AGVLAHLEEERDLKITDIIVFFQAAARGYLARRAFYKKQQQMSALKVVQRNCAAYLKLRHWQWWR 843

  Fly   831 LWQKVKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAK---LLAEKTALLDSLSG 892
            |:.||||||.|:| :||:  ::.|..:.:::...:||...||:.:..|   |..||:.|.:.|..
 Frog   844 LFTKVKPLLQVTR-QDEV--MQAKVVELQKVKDTQVKTESELKEMANKYQQLFEEKSILAEQLQA 905

  Fly   893 EKGALQDYQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLE 957
            |.....:.:|..|:|.::|.:||..|.|::.|:.:||:...||..:|||..|.|..|::.:|:.|
 Frog   906 ETELFAEAEEMRARLASKKQELEEILHDLEARVEEEEERTLQLQNEKKKMHQHIQDLEEQLEEEE 970

  Fly   958 LNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQ----GETNQKTGEELQAAEDKINH 1018
            ...||.:.:|.|.:.:::.:.::|...::...||.||:|:.    ||......||    |:|:..
 Frog   971 GARQKLQLEKVTTESRLKKMEEDILLLEDQNAKLAKERKLLDDRIGEFTSTMAEE----EEKVKS 1031

  Fly  1019 LNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKD 1083
            |||::.|.|..:.:|||.|::|:|.|.::||.|||::|:....|:.:.:|::..:||:|.:.||:
 Frog  1032 LNKLRNKYEAVIADLEDRLKKEEKGRQEMEKMKRKLDGETTDLQDQLLELQQQIEELKQQLARKE 1096

  Fly  1084 KELSSITAKLEDEQVVVLKHQ--RQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELG 1146
            :||.:..|:::||  |..|:.  :|:::||:::.||.|::|:|:.|||||||||.||..|||.|.
 Frog  1097 EELQAALARVDDE--VGQKNNLLKQLRDLQSQLAELHEDLESEKAARAKAEKQRRDLGEELEALK 1159

  Fly  1147 ERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNK 1211
            ..||:...:|:||.||..|||.|::.|::.:||.....::.:..:|::||..|.|::||::|..:
 Frog  1160 TELEDTLDSTAAQQELRAKREQEVTDLKKTIEEDVKVRDAQVTEMRQRHNQVVEEISEQLEQARR 1224

  Fly  1212 LKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASK 1276
            .|...||.|.....:..||...|.::...|...|:..|:|:..::|.|.:.:|:.:...:.....
 Frog  1225 FKGNLEKVKQTLESENTDLIKEVKNLQAAKQDSEQRRKKLEQQVSEFQIRTNESEKVKFELAEKL 1289

  Fly  1277 KKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDN 1341
            :||..|...:...|...|.:..:|:|...::.:||:||:.|..||:|::.....:.|.||.:.:|
 Frog  1290 QKLQAELDGVSGALGSTEGKSIKLTKDLSTVQSQLQDTQELLQEETRQKLNFSSRVRQLEEEKNN 1354

  Fly  1342 LREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRK-------LQARLAEA 1399
            |.|.:|||...||.|.|||.....:....:.:.|..| ...|.:||||:|       ||.|..|.
 Frog  1355 LMENLEEEESAKAQLSRQLQALQQQLLESKKRMEDQG-GMVEAMEEAKKKSYKELEFLQQRFDEK 1418

  Fly  1400 EETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAA 1464
            .:    :|.|   ||||:.||..|::||.:::|....|.:..|||||.||:::.|.|........
 Frog  1419 HQ----INDK---LEKTRNRLQQELDDLMVDLDHQRQIVSNLEKKQKKFDQMLAEEKNISARYGE 1476

  Fly  1465 ELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKAR 1529
            |.|.::.|.|...|:...|..|.||..:..:.:.|:||.|..|:.||:....:.|:|:||:|:::
 Frog  1477 ERDRAEAEAREKETKALSLSRALEEAIDLKDELDRQNKQLRAEMDDLVSSKDDVGKNVHELERSK 1541

  Fly  1530 KRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALD 1594
            :.||.:..|::..:||.|..|:..|:..||.::.:..::.:.:|.:|.:::..:..:|...:.:.
 Frog  1542 RALEQQVQEMKTQIEELEDELQAIEDGKLRLEVNMQAMKAQFERDLQNRDDSNDEKKKLLFKQVR 1606

  Fly  1595 SMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEE 1659
            .|:..||.|.|.|::.|..|||||.|:.::|..:|.|||...||.|.:|:.|.|.|::...:||.
 Frog  1607 EMEVELEEERKQKSQILAAKKKLEMDLQDMESQMDSANKGRDEAVKQLKKLQLQFKEVWREVEET 1671

  Fly  1660 QRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQL-NEVSAQNASIS 1723
            :.|||:...|...:|::..:|:.||.:.:..|..|:|.:|||:||..|..::| |.||.::|.:.
 Frog  1672 RAARDEIFVQSRDNEKKLKSLEAELLQLQEDLAAAERAKRQAQQERDDLADELSNGVSGKSALLD 1736

  Fly  1724 AAKRKLESELQTLHSDLDELLNEAKNSE---EKAKKAMVDAARLADELRAEQDHAQTQEKLRKAL 1785
             .||.||..:..|..:|||   |..|:|   ::.:|..:....:..||.||:..:|..|..|:.:
 Frog  1737 -EKRALEMRISQLEEELDE---EQSNTELINDRYRKLTLQVETITTELSAERSFSQKAENARQQM 1797

  Fly  1786 EQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRVKELS 1850
            |:|.|||:|:|:|.::......|..|..||.::.:||.:::.|.:....|.|.:|::|:|:||:.
 Frog  1798 ERQNKELKVKLNEMDSTMRSKYKITIASLEAKISQLEEQMEQESKERIIANKLVRRAEKRLKEVL 1862

  Fly  1851 FQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQA 1915
            .|.||:|:|.::.::.::|...::|..|||:|||||.|:...:..|:.|:|||:..|.|:...:.
 Frog  1863 LQVEEERRNADQFKEQLEKANIRMKQLKRQLEEAEEEASRANSNRRRLQRELEDVTESAESMNRE 1927

  Fly  1916 ISKFRAK 1922
            ::..|::
 Frog  1928 VTTLRSR 1934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 12/37 (32%)
MYSc 81..777 CDD:214580 362/714 (51%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 341/683 (50%)
Myosin_tail_1 842..1897 CDD:279860 347/1074 (32%)
V_Alix_like 1557..1877 CDD:187408 102/323 (32%)
ATP-synt_B <1671..1771 CDD:304375 32/103 (31%)
TMPIT 1739..>1825 CDD:285135 28/88 (32%)
LOC100493774XP_004916275.2 Myosin_N 33..71 CDD:397036 13/37 (35%)
MYSc_Myh10 99..778 CDD:276952 341/683 (50%)
Myosin_tail_1 855..1935 CDD:396244 355/1101 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7949
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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