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Protein Alignment Mhc and myh11

DIOPT Version :10

Sequence 1:	NP_523587.4	Gene:	Mhc / 35007	FlyBaseID:	FBgn0264695	Length:	1962	Species:	Drosophila melanogaster
Sequence 2:	XP_031748845.1	Gene:	myh11 / 100490639	XenbaseID:	XB-GENE-6459772	Length:	1980	Species:	Xenopus tropicalis

Alignment Length:	263	Identity:	47/263 - (17%)
Similarity:	92/263 - (34%)	Gaps:	67/263 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 GYPDLEIAVRTAELMFESNAFFGML-MFSFQRDNYERLVHQLQ-----DLAALVL--------QD 124
            |....::|...::::...:.|..:: ...:.|:.|:.:...||     ::.|:::        ||
Frog   793 GIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQD 857

  Fly   125 LPTELGEYLISVNRRVDRFSKIYCCCHFSMATFFWFMPVWTTYSAYFAVRNSTEPVEHVLHLEEE 189
            .|.:..: ::.||..:|.|:        |:|.                   :|||....|.|.:.
Frog   858 SPLKAVQ-MLWVNLIMDTFA--------SLAL-------------------ATEPPTETLLLRKP 894

  Fly   190 LYF----LHIRTSMAHYTFYVAIMWPTIYTLGFTGGTKLLTIFSN---------VKYCSAMLKLV 241
             |.    |..||.|.:...:.......|:||.|. |.|:..|.|.         .::.:.:....
Frog   895 -YGRNKPLISRTMMKNILGHAVYQLALIFTLLFV-GEKMFQIDSGRNAPLHSPPSEHYTIIFNTF 957

  Fly   242 ALRHCLARVAQDRAEKELNEIISMHQRVLDCVFLLETTFRWVFFVQF----IQCT------MIWC 296
            .:......:...:...|.|....:.:..:.|..:|.|....:..|||    ..|:      .:||
Frog   958 VMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLGTFAIQIVIVQFGGKPFSCSPLQLDQWMWC 1022

  Fly   297 SLI 299
            ..|
Frog  1023 IFI 1025

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.