DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhc and myh11

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_031748845.1 Gene:myh11 / 100490639 XenbaseID:XB-GENE-6459772 Length:1980 Species:Xenopus tropicalis


Alignment Length:1972 Identity:793/1972 - (40%)
Similarity:1196/1972 - (60%) Gaps:51/1972 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EDEDPTPYLFV--SLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQ-GGEVR 70
            |||   .:|||  :|....:.|: .:.:||..|||.||.|:....||..|||.|.|.:| .|:..
 Frog     8 EDE---KFLFVDKNLMNNPLAQA-DWTAKKLVWIPSEKHGFEAASIKEEKGDEVVVEMQENGKKI 68

  Fly    71 DIKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVY 135
            .|..:.::|:|||||.|:||||::|.||...||||||:||::.|||||||||||.:||||..|:|
 Frog    69 TISKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVVNPYKALPIY 133

  Fly   136 TNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVG 200
            :.:...||:||:|:|:||||:||:|.||..||.:..:||:|.||||||||||||||||.|.|.|.
 Frog   134 SEKIIDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVA 198

  Fly   201 ASKK-------TDEAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLA 258
            :|.|       |...:.:.|.||.|::|.||:||||||||||:|||||||||||||:|..||.:.
 Frog   199 SSHKGKKDTTITQGPSFAYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIV 263

  Fly   259 GADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASID 323
            ||:||||||||:|.|.|...||::||||.::.|:.|..:: .||.:...:|..:|.|.|.|.:.|
 Frog   264 GANIETYLLEKSRAIRQARDERTFHIFYYLIQGAKPAWRE-DLLLEGFGNYTFLSYGYVPVPAAD 327

  Fly   324 DAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFG 388
            |.:.|..|.:|.:|:||::.|:..:.|:.::|:.:|.:.||:....:||....:....:|..|.|
 Frog   328 DGDMFQETLEAMEIMGFSEDEQLSMMRVVSSVLQLGNIVFKKERNTDQASMPDDTAAQKVCHLAG 392

  Fly   389 CDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLD-TQQKR 452
            .:..:..:.:|.||||||.:||.:.:..:|...:|.||.|..::|||.|::.:.|:.|| |:::.
 Frog   393 INVTDFARCILTPRIKVGRDFVQKAQTKEQADFAIEALAKATYERLFLWILNRVNKALDKTKRQG 457

  Fly   453 QHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLL 517
            ..|:|:||||||||||.|.|||||||:|||||||.|||.||:||||||:||||:|.|||||:||.
 Frog   458 ASFLGILDIAGFEIFEVNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQ 522

  Fly   518 ACIDLIEK---PMGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAI 579
            .||:|||:   |.|||::|:||..||||||.:|.||:.... |....|||.|..|   ....|.:
 Frog   523 PCIELIERPNNPPGILALLDEECWFPKATDVSFVEKVIQEQ-GNHIKFQKTKQLK---DKTIFTL 583

  Fly   580 AHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAK--------G 636
            .||||.|.|:.|.||.||.|||||.|.....:|.:|.:.:::.|.....|..:.||        .
 Frog   584 VHYAGKVDYDATSWLTKNMDPLNDNVTALLNQSSDKFVGDLWKDVDRIVGLDQMAKMTESSLPSA 648

  Fly   637 GRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLE 701
            .:.|| |.|.||...|||||..||||||:|.|:||||||||..|:.|.:|||||:.||.||||||
 Frog   649 SKTKK-GMFRTVGQLYKEQLTKLMTTLRNTSPNFVRCIIPNHEKRSGKLDAHLVLEQLRCNGVLE 712

  Fly   702 GIRICRKGFPNRMMYPDFKMRYKIM----CPKLLQGVEKDKKATEIIIKFIDLPEDQYRLGNTKV 762
            ||||||:|||||:::.:|:.||:|:    .||   |....|::..:::|.::|..:.||:|.:||
 Frog   713 GIRICRQGFPNRIVFQEFRQRYEILTAGAIPK---GFMDGKQSCMLMMKALELDTNLYRIGQSKV 774

  Fly   763 FFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWP 827
            |||.|||..:||.||.::..|:...||.|||:|:||.|.|.|:|..|:||:|||...||:||.|.
 Frog   775 FFRTGVLAHLEEERDLKITDIIITFQALARGFLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQ 839

  Fly   828 WYKLWQKVKPLLNVSRIEDEIARLEEKAKKA-EELHAAEVKVRKELEALNAKLLAEKTALLDSLS 891
            |::|:.||||||.|:|.|:|:...:|:.::. |:....|::: ||::..:.:|:.|||.|.:.|.
 Frog   840 WWRLFTKVKPLLQVTRQEEEMQLKDEELQRVNEKFFKTEIEL-KEIQMKHIQLVEEKTLLQEQLQ 903

  Fly   892 GEKGALQDYQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDL 956
            .|.....:.:|...:|.|:|.:||..|.:::.||.:|||...||..:|||..|::..|::.:|:.
 Frog   904 AETELYAEAEELRIRLQAKKQELEEVLHEMEVRLEEEEDRGQQLQAEKKKTLQQMQDLEEQLEEE 968

  Fly   957 ELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNK 1021
            |...||.:.:|.|.:.:|:.|.|::...|:..|||.||||:..|........|...|:|..:|.|
 Frog   969 EAARQKLQLEKVTAEAKIKKLEDDVLVMDDHHNKLTKEKKILEERVNDLTTNLAEEEEKAKNLTK 1033

  Fly  1022 VKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKEL 1086
            :|.|.|..:.|||..|::|:|.|.::||.|||:||:.....|.:|||:....||:..:.:|::||
 Frog  1034 LKNKHESMISELEVRLKKEEKGRQELEKVKRKLEGEANDLNEQIADLQAQIAELKMQLAKKEEEL 1098

  Fly  1087 SSITAKLEDEQVVVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEE 1151
            .:..|:||||........::|:||::.|.:|:|::|:|:.||.||||.:.||..|||.|...||:
 Frog  1099 QAALARLEDETAQKNNALKKIRELESHISDLQEDLESEKSARNKAEKSKRDLGEELEALKTELED 1163

  Fly  1152 AGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKA 1216
            ...:|:.|.||..|||.|::.|:|.|||....|||.:..:|:||..||.|:.||::|:.:::...
 Frog  1164 TLDSTATQQELRAKREQEVTVLKRALEEETRSHESQVQEMRQKHTQAVEELTEQLEQVKRVRVTL 1228

  Fly  1217 EKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSI 1281
            ||.|.......::|...:..:...|...|...|:|:..|.|:|||..:..|..|:......::.:
 Frog  1229 EKSKQALEKDNSELTIEIRSLNQAKQDVEHKKKKLESQLQELQSKYTDGERVRNELTEKSHRVQV 1293

  Fly  1282 ENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQV 1346
            |..::...|.|||::..:.||....||.||:||:.|..||:|::..:..|.|.:|.:.::|:||:
 Frog  1294 ELENVTVLLSEAETKSIKFSKDVAGLTAQLQDTQELLQEETRQKLNVSTKLRQVEDERNSLQEQL 1358

  Fly  1347 EEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCI 1411
            :||.|.|..|:|.:|..|.:....:.|.: :..|..|.:||.|:|||..:..|.:..|.......
 Frog  1359 DEETEAKQTLERHISTLNIQLSDSKKKLQ-EFTATIESMEEGKKKLQRDIESATQQFEEKASAYD 1422

  Fly  1412 GLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNY 1476
            .|||||.||..|::||.:::|....:.:..|||||.||:::.|.|......|.|.|.::.|.|..
 Frog  1423 KLEKTKNRLQQELDDLIVDLDNQRQLVSNLEKKQKKFDQMLAEEKTISSKYADERDRAEAEAREK 1487

  Fly  1477 STELFRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQA 1541
            .|:...|..|.:|..:..|.:.|.||.|..|::||:....:.|:|:|::|||::.||.:.:|::.
 Frog  1488 ETKALSLARALDEALQSKEELERTNKLLKAEMEDLVSSKDDVGKNVHDLEKAKRGLEQQVEEMKT 1552

  Fly  1542 ALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKG 1606
            .|||.|..|:..|:..||.::.:..::.:.:|.:..::|:.|..|:...:.:...:..||.|.|.
 Frog  1553 QLEELEDELQATEDAKLRLEVNMQALKAQFERDLLARDEQNEEKRRQLVKQVHEYETELEDERKQ 1617

  Fly  1607 KAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDD----AR 1667
            :..|...|||||.|:.:||..:|.|::|..||.|.:::.|.|:||.|..|:|.:.||::    ||
 Frog  1618 RTVAAAAKKKLEVDLKDLEGQVDFASRARDEAIKQLRKLQGQMKDFQRDLDEARNAREEIFATAR 1682

  Fly  1668 EQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESE 1732
            |    :|::|.:|:.||.:.:..|..|:|.|:|||.|..:..|:|...::..:|:...||:||:.
 Frog  1683 E----NEKKAKSLEAELIQLQEDLAAAERARKQAELEKEELAEELAGSASGKSSLQDEKRRLEAR 1743

  Fly  1733 LQTLHSDLDELLNEAKNSEEKAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLD 1797
            :..|..:|:|.....:...::.:||:..|.:|.:||.||:..:|..|..|:.||:|.|||:.:|.
 Frog  1744 ISQLEEELEEEQGNMEGMSDRMRKAVQQAEQLNNELAAERSTSQKNESARQQLERQNKELKAKLQ 1808

  Fly  1798 EAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHER 1862
            |.|.......|..|..||.::.:||.:::.|.|......|.||:.|:::||...|.|::||..|:
 Frog  1809 EMEGTVKSKFKSTIAALEAKISQLEEQVEQESRDKQSTVKTLRQKEKKLKEALLQVEDERKQAEQ 1873

  Fly  1863 MQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGRAGS 1927
            .:|..:|...:.|..|||:|||||.:....|..||.|:||:||.|.::...:.::..::|.|.|:
 Frog  1874 YKDQSEKGNVRQKQLKRQLEEAEEESQRINASRRKLQRELDEANESSEALSRELNSLKSKLRRGN 1938

  Fly  1928 VGRGASPAPRATSVRPQFDGLA 1949
            ....|.|. |:...|...|..|
 Frog  1939 EPSFAPPR-RSGGSRRAVDNAA 1959

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 16/37 (43%)
MYSc 81..777 CDD:214580 359/718 (50%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 339/687 (49%)
Myosin_tail_1 842..1897 CDD:279860 355/1059 (34%)
V_Alix_like 1557..1877 CDD:187408 102/323 (32%)
ATP-synt_B <1671..1771 CDD:304375 29/99 (29%)
TMPIT 1739..>1825 CDD:285135 28/85 (33%)
myh11XP_031748845.1 Myosin_N 32..71 CDD:397036 17/38 (45%)
Motor_domain 98..777 CDD:419868 339/687 (49%)
Myosin_tail_1 854..1934 CDD:396244 363/1085 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 86 1.000 Domainoid score I7949
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

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