DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhc and myh9

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_017949131.2 Gene:myh9 / 100487997 XenbaseID:XB-GENE-1002222 Length:1960 Species:Xenopus tropicalis


Alignment Length:1956 Identity:784/1956 - (40%)
Similarity:1196/1956 - (61%) Gaps:55/1956 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QEDEDPTPYL---FVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGL-QGGE 68
            |:|.|...|:   ||:....:.|    :.:||..|:|.||.|:....:|...||...|.| :.|:
 Frog     3 QKDADKYLYVDRNFVNNPLAQAD----WAAKKLVWVPSEKHGFEAASVKEEVGDEAIVELAENGK 63

  Fly    69 VRDIKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYP 133
            ...:..:.::|:|||||.|:|||:::..||...|||||::|||:.|||||||||||.|||||..|
 Frog    64 KAKVNKDDIQKMNPPKFSKVEDMSELACLNEASVLHNLKERYYSGLIYTYSGLFCVVINPYKYLP 128

  Fly   134 VYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFAT 198
            :|:....:||:||:|:|:||||:||:|.||..|:.:..:||:|.||||||||||||||||.|.|.
 Frog   129 IYSEEIVEMYKGKKRHEMPPHIYAITDTAYRSMMQDREDQSILCTGESGAGKTENTKKVIQYLAY 193

  Fly   199 VGASKKTDEAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIE 263
            |..|.|   :.|.:|.||.|::|.||:||||||||||:|||||||||||||:|...|.:.||:||
 Frog   194 VATSHK---SKKEQGELERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVNGYIVGANIE 255

  Fly   264 TYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYD-YHIVSQGKVTVASIDDAEE 327
            ||||||:|.|.|...||::||||.::||:...:|...||  ..|: |..:|.|.||:....|.:.
 Frog   256 TYLLEKSRAIRQAKEERTFHIFYYLLSGAGEHLKSDLLL--EAYNKYRFLSNGHVTIPGQQDKDL 318

  Fly   328 FSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTA 392
            |..|.:|..|:|||::|:..:.|:.::|:.:|.:.||:....:||.........::..|.|.:..
 Frog   319 FQETMEAMKIMGFTEEEQIGLLRVVSSVLQLGNIAFKKERNTDQASMPDNTAAQKLCHLMGINVN 383

  Fly   393 ELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLD-TQQKRQHFI 456
            :..:.:|.||||||.:||.:.:..:|...:|.||.|..::|:|:|||.:.|:.|| |:::...||
 Frog   384 DFTRGILLPRIKVGRDFVQKAQTKEQADFAIEALAKATYERMFRWLVMRVNKALDKTKRQGASFI 448

  Fly   457 GVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACID 521
            |:||||||||||.|.|||||||:|||||||.|||.||:||||||:||||:|.|||||:||..||:
 Frog   449 GILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIE 513

  Fly   522 LIEKPM---GILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYA 583
            |||||.   |||::|:||..||||||::|.||:.... |..:.|||||..|   ..|.|.|.|||
 Frog   514 LIEKPAGPPGILALLDEECWFPKATDKSFVEKVVQEQ-GSHSKFQKPKQLK---DKADFCIIHYA 574

  Fly   584 GCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKG-------GRGK- 640
            |.|.|....||.||.|||||.|.....:|.:|.:.|::.| ..:..|.:|..|       |..| 
 Frog   575 GKVDYKADEWLLKNMDPLNDNVATLLNQSSDKFVSELWRD-VDRIVGLDQVAGMADTALPGAFKT 638

  Fly   641 KGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRI 705
            :.|.|.||...|||||:.||.|||:|.|:||||||||..|:.|.:|||||:.||.||||||||||
 Frog   639 RKGMFRTVGQLYKEQLSKLMATLRNTNPNFVRCIIPNHEKKSGKLDAHLVLDQLRCNGVLEGIRI 703

  Fly   706 CRKGFPNRMMYPDFKMRYKIMCPKLL-QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVL 769
            ||:|||||:::.:|:.||:|:.|..: :|....|:|..::||.::|..:.||:|.:|||||||||
 Frog   704 CRQGFPNRVVFQEFRQRYEILTPNSIPKGFMDGKQACVLMIKALELDSNLYRIGQSKVFFRAGVL 768

  Fly   770 GQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQK 834
            ..:||.||.::..::...||:.||||:||.|.|.|:|..|:||:|||...||:||.|.|::|:.|
 Frog   769 AHLEEERDLKITDVIISFQAFCRGYLARKAFAKRQQQLTAMKVIQRNCAAYLKLRNWQWWRLFTK 833

  Fly   835 VKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQD 899
            |||||..:|.::|:...|.:.:|.:||..:..:...|:|.:...|..||..|.:.|..|.....:
 Frog   834 VKPLLQANRFDEELHAKEVELQKVKELQVSSEQKVSEMENVQMMLQQEKMQLQEQLQAEIELCAE 898

  Fly   900 YQERNAKLTAQKNDLENQLRDIQERLTQEEDARNQLFQ-QKKKADQEISGLKKDIEDLELNVQKA 963
            .:|..|:|..:|.:||..|.|::.|: :||:.|.|:.| .|||....|..|::.:|:.|...||.
 Frog   899 AEEMRARLATKKQELEEILHDLESRV-EEEEERCQILQADKKKMQHNIVELEEQLEEEEAARQKL 962

  Fly   964 EQDKATKDHQIRNLNDEIAHQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQ 1028
            :.:|.|.:.:::.|.:::...::..:||.||||:..|...:....|...|:|...|.|:|.|.|.
 Frog   963 QLEKVTVEAKMKKLEEDVLVLEDQNSKLGKEKKLYEERIAEFTTNLAEEEEKSKSLAKLKNKHET 1027

  Fly  1029 TLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKL 1093
            .:.:||:.|.||:|.|.::||::||:|||.....:.:|:|:....||:..:.:|::||.:..|::
 Frog  1028 MISDLEERLRREEKQRQELEKTRRKLEGDSTDLHDQIAELQAQIAELKMQLAKKEEELQAALARV 1092

  Fly  1094 EDEQV---VVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGA 1155
            |:|..   :.||   :|:||:::|.||:|::|.||.||.|||||:.||..|||.|...||:...:
 Frog  1093 EEESAQKNIALK---KIRELESQISELQEDLETERAARNKAEKQKRDLGEELEALKTELEDTLDS 1154

  Fly  1156 TSAQIELNKKREAELSKLRRDLEEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEK 1220
            |:||.||..|||.|:::|::.||:....||..:..:|:||:.||.|::||::|..:||...||.|
 Frog  1155 TAAQQELRTKREQEVTQLKKTLEDEARTHEVQIQEIRQKHSQAVEELSEQLEQTKRLKGNLEKAK 1219

  Fly  1221 NEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSD 1285
            ....|:.|:|...|..:...|...|...|:::..|.|:|.|:.|.:|...:......:|.:|..:
 Frog  1220 QSLEGERNELANEVKALLQGKGDSEHKRKKVEGQLQELQVKVTEGDRVRAELSEKANRLQVELDN 1284

  Fly  1286 LLRQLEEAESQVSQLSKIKISLTTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEA 1350
            :...|.:|:.:..:|.|...:|.:||:||:.|..||:|::.:...|.:.:|.:.:.|.||:|||.
 Frog  1285 VNSLLSQADGKSIKLGKDFSTLESQLQDTQELLQEETRQKLSFSTKLKQMEDEKNGLLEQIEEEE 1349

  Fly  1351 EGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEK 1415
            |.|.:|.:|:|...::....:.|.: :.|...|.:||.|:|||..|....:..|........|||
 Frog  1350 EAKKNLSKQISTLQSQMADMKKKMD-ENVGSLETVEELKKKLQKDLESVNQRFEEKAAAYDKLEK 1413

  Fly  1416 TKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTEL 1480
            ||.||..|::|:.:::|....|.:..|||||.||:::||.|......|.|.|.::.|.|...|:.
 Frog  1414 TKTRLQQELDDIAVDLDHQRQIVSNLEKKQKKFDQLLGEEKTISAKYADERDRAEAEAREKETKA 1478

  Fly  1481 FRLKGAYEEGQEQLEAVRRENKNLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEE 1545
            ..|..:.||..|....:.|.||.|..|::||:....:.|:::||:||:::.||.:.:|::..|||
 Frog  1479 LALARSLEEALEAKAELERLNKQLRTEMEDLVSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEE 1543

  Fly  1546 AEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEA 1610
            .|..|:..|:..||.::.|..::.:.:|.:|.::|:.|:.:|...|.:..|:|.||.|.|.::.|
 Frog  1544 LEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEDKKKQLVRQVKEMEAELEDERKQRSVA 1608

  Fly  1611 LRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISER 1675
            :..:||||.|:.:||..:|.|||...||.|.:::.|.|:||.|..|::.:.:|||...|...||:
 Frog  1609 VAARKKLEMDLKDLEGQIDSANKNREEAIKQLRKLQAQIKDYQRELDDTRASRDDILSQSKESEK 1673

  Fly  1676 RANALQNELEESRTLLEQADRGRRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDL 1740
            :..:::.|:...:..|..|:||:|||:||..:..:::...|.:.|.....||:|||.:..|..:|
 Frog  1674 KLKSMEAEMIHMQEELAAAERGKRQAQQERDELADEIANNSGKGALALEEKRRLESRIAQLEEEL 1738

  Fly  1741 DELLNEAKNSE---EKAKKAMVDAARLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEAN 1802
            :|   |..|:|   ::.|||.:...:|..:|.||:.:||..|..|:.:::|.|||:.:|.|.|..
 Frog  1739 EE---EQGNTELVNDRLKKATLQVDQLNADLNAERSNAQKNENARQQMDRQNKELKTKLQELEGT 1800

  Fly  1803 ALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLV 1867
            .....|..|..||.::.:||.:||.|.:...:|.|.:|::|:::|::..|.:::|:|.|:.:|..
 Frog  1801 VKSKFKANITALEAKIAQLEEQLDTETKERQNASKQVRRTEKKLKDVMMQVDDERRNAEQYKDQA 1865

  Fly  1868 DKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKGRAGS----- 1927
            :|...::|..|||:|||||.|....|..||.|:|||:|.|.|:...:.::..::|.|.|.     
 Frog  1866 EKNNVRMKQLKRQVEEAEEEAQRANAMRRKLQRELEDATETAEAMNREVNTLKSKLRRGGDVPFV 1930

  Fly  1928 ---VGR 1930
               :||
 Frog  1931 TRRIGR 1936

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 12/37 (32%)
MYSc 81..777 CDD:214580 364/709 (51%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 345/678 (51%)
Myosin_tail_1 842..1897 CDD:279860 352/1061 (33%)
V_Alix_like 1557..1877 CDD:187408 104/322 (32%)
ATP-synt_B <1671..1771 CDD:304375 30/102 (29%)
TMPIT 1739..>1825 CDD:285135 29/88 (33%)
myh9XP_017949131.2 Myosin_N 29..68 CDD:397036 13/38 (34%)
Motor_domain 95..764 CDD:419868 345/678 (51%)
Myosin_tail_1 842..1921 CDD:396244 361/1086 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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