DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhc and LOC100329813

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_021326090.1 Gene:LOC100329813 / 100329813 -ID:- Length:1938 Species:Danio rerio


Alignment Length:1917 Identity:1067/1917 - (55%)
Similarity:1424/1917 - (74%) Gaps:10/1917 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 PYLFVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRDIKSEKVEK 79
            |||..|..:|...|::|:|.||.|::||..|.|:.|.|.:..||.|:...:.|:...:|...|..
Zfish    14 PYLRKSDRERLEAQTRPFDMKKECFVPDTDEEYVKGSIISRDGDKVTCETEKGKTVTVKECDVHP 78

  Fly    80 VNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYR 144
            .|||||:||||||..|.|:.|.||.||::||.|.:||||||||||.:||||..|||.......||
Zfish    79 QNPPKFDKIEDMAMFTFLHEPAVLFNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNQEVVLAYR 143

  Fly   145 GKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAA 209
            ||:|:|.|||||:|||.||..||::..|||:|||||||||||.|||:||.|||::.||....|..
Zfish   144 GKKRSEAPPHIFSISDNAYQYMLSDRENQSILITGESGAGKTVNTKRVIQYFASIAASPTKKETT 208

  Fly   210 KSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVIS 274
            :.||:||||::|.||.|||||||||:||||||||||||||||...||||.||||||||||:||..
Zfish   209 EKKGTLEDQIIQCNPALEAFGNAKTIRNDNSSRFGKFIRIHFAANGKLASADIETYLLEKSRVTF 273

  Fly   275 QQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILG 339
            |...||.|||||||:|...|.:.::.|:|.|.|||..:|||:..||||:||:|...||:|||:||
Zfish   274 QLKAERDYHIFYQILSQKKPELLEMLLITANPYDYAFISQGETQVASINDADELMATDEAFDVLG 338

  Fly   340 FTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIK 404
            ||::||..:|::..|:||.|.|||||:.||||||.||.|:..:.:.|.|.::|:|.|.|..||:|
Zfish   339 FTQEEKNSIYKLIGAIMHYGNMKFKQKQREEQAEADGTEDADKSAYLMGLNSADLLKALCHPRVK 403

  Fly   405 VGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEY 469
            ||||:||:|:|||||..::|||.|.|::::|.|:|.:.|::|||:|.||:|||||||||||||::
Zfish   404 VGNEWVTKGQNVQQVYYAVGALSKSVYEKMFLWMVVRINQSLDTRQPRQYFIGVLDIAGFEIFDF 468

  Fly   470 NGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILE 534
            |.||||||||||||||||||||||||||||||:|||:|.||||||||.||||||||||||:||||
Zfish   469 NTFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQACIDLIEKPMGIMSILE 533

  Fly   535 EESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKD 599
            ||.|||||:|.||..||.:.|||||..||||:..| |:..|||::.||||.|.|||..||.||||
Zfish   534 EECMFPKASDATFKAKLYDNHLGKSNNFQKPRIVK-GKPEAHFSLVHYAGTVDYNINNWLVKNKD 597

  Fly   600 PLNDTVVDQFKKSQNKLLIEIFADHAG----QSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLM 660
            |||:|||..::||..|||..:||::.|    ..|||.:.| .:.|||..|.|||:.::|.||.||
Zfish   598 PLNETVVGLYQKSTMKLLSNLFANYTGADLAMEGGGGKTK-EKKKKGSSFQTVSALHRENLNKLM 661

  Fly   661 TTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKI 725
            |.||||.|||||||||||.|.||.::..||||||.||||||||||||||||||::|.|||.||:|
Zfish   662 TNLRSTHPHFVRCIIPNETKTPGAMENPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFKQRYRI 726

  Fly   726 MCPKLL---QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWM 787
            :.|..:   |.:: .:|..|.::..:|:..:||:.|:|||||:||:||.:||.||:||..|::.:
Zfish   727 LNPAAIPDGQFID-SRKGAEKLLGSLDIDHNQYKFGHTKVFFKAGLLGTLEEMRDDRLALIITNI 790

  Fly   788 QAWARGYLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLE 852
            ||.:||.|||..|:||.::|.||.|:|.|:|.::.::.|||.||:.|:||||..:..|.|:|.::
Zfish   791 QARSRGLLSRIEFQKLVDRRDALLVIQWNVRAFMGVKNWPWMKLYFKIKPLLRSAEAEKEMANMK 855

  Fly   853 EKAKKAEELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQERNAKLTAQKNDLENQ 917
            |:..|.:|.:|.....|||||.....||.||..|..::..|:..|.|.:||...|...|..||.:
Zfish   856 EEFLKLKEAYAKSEARRKELEEKMVSLLQEKNDLQLAVQAEQDNLCDAEERCEGLIKNKIQLEAK 920

  Fly   918 LRDIQERLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIA 982
            .:::.|||..||:...:|..:|:|.:.|.|.|||||:||||.:.|.|::|...:::::||.:|:|
Zfish   921 AKELTERLEDEEEMNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMA 985

  Fly   983 HQDELINKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDV 1047
            ..||:|.:|.||||...|.:|:|.::||:.|||:|.|.|.||||||.:|:||.|||:|||:|.|:
Zfish   986 ALDEIIARLTKEKKALQEAHQQTLDDLQSEEDKVNTLTKAKAKLEQQVDDLEGSLEQEKKLRMDL 1050

  Fly  1048 EKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLEDEQVVVLKHQRQIKELQA 1112
            |:.|||:|||||||||:|.|||.:|::||:.:::||.|:|.:|:::||||.:..:.|:::|||||
Zfish  1051 ERVKRKLEGDLKLTQESVMDLENDKQQLEERLKKKDFEISQLTSRIEDEQAMATQLQKKLKELQA 1115

  Fly  1113 RIEELEEEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDL 1177
            ||||||||:||||.||||.|||||||:|||||:.||||||||||:||||:|||||||..||||||
Zfish  1116 RIEELEEELEAERAARAKVEKQRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDL 1180

  Fly  1178 EEANIQHESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKA 1242
            |||.:|||:|.:.|||||.|:|:::.||:|.|.::|.|.||||:|...:|:|:.:.::.:...||
Zfish  1181 EEATLQHEATASTLRKKHADSVSDLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQLAKAKA 1245

  Fly  1243 AQEKIAKQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISL 1307
            ..|||.:.|:..::|.::|.:|..|::|||...|.:|..||.:|.|||||.:|.||||::.|.|.
Zfish  1246 NLEKICRTLEDQMSEYRTKYEEGQRSINDFTMQKARLQTENGELTRQLEEKDSLVSQLTRSKQSY 1310

  Fly  1308 TTQLEDTKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRS 1372
            |.|:||.||..:||.:.:..|....::..||.|.||||.|||.|.||:|||.|||||:|...||:
Zfish  1311 TQQIEDLKRQLEEEVKAKNALAHAVQSARHDSDLLREQYEEEQEAKAELQRSLSKANSEVAQWRT 1375

  Fly  1373 KYESDGVARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAI 1437
            |||:|.:.|:||||:||:||..||.:|||.:|::|.||..|||||.||..|:|||.::|:|:||.
Zfish  1376 KYETDAIQRTEELEDAKKKLAQRLQDAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMVDVERSNAA 1440

  Fly  1438 ANAAEKKQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENK 1502
            |.|.:|||:.|||::.|||.|.::..:||::||||.|:.|||||:||.:|||..:.||:::||||
Zfish  1441 AAALDKKQRNFDKVLAEWKQKYEESQSELESSQKEARSLSTELFKLKNSYEESLDHLESMKRENK 1505

  Fly  1503 NLADEVKDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQV 1567
            ||.:|:.||.:||||.|:||||:||.||:||.||.|:||||||||.:||.||.|:||||||.||:
Zfish  1506 NLQEEIADLTEQIGESGKNIHELEKMRKQLEQEKAEIQAALEEAEGSLEHEEGKILRAQLEFSQI 1570

  Fly  1568 RQEIDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHAN 1632
            :.:|:|::.||:||.|..::|.||.:|::|:|||:|.:.:.||||:|||:|.|:||:||.|..||
Zfish  1571 KADIERKLSEKDEEMEQAKRNQQRMIDTLQSSLESETRSRNEALRLKKKMEGDLNEMEIQLSQAN 1635

  Fly  1633 KANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRG 1697
            :..:||||.:|..|..|||.|..|::..||.||.:|.:.|.|||.|.||.||:|.|:|:||.:||
Zfish  1636 RQASEAQKQLKSLQGHLKDAQMQLDDALRANDDLKENIAIVERRNNLLQAELDELRSLVEQTERG 1700

  Fly  1698 RRQAEQELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKKAMVDAA 1762
            |:.|||||.|..|::..:.:||.|:...|:|||.:...|.::::|.:.|.:|:|||||||:.|||
Zfish  1701 RKLAEQELMDVSERVQLLHSQNTSLLNQKKKLEGDNTQLQTEVEEAVQECRNAEEKAKKAITDAA 1765

  Fly  1763 RLADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDG 1827
            .:|:||:.|||.:...|:::|.:||.||:||.||||||..|:|||||.:||||.||||||||::.
Zfish  1766 MMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQIAMKGGKKQVQKLEARVRELENEVEL 1830

  Fly  1828 EQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNL 1892
            ||::.:::.|.:||.|||:|||::|:||||||..|:||||||||.|:|:|||..|||||.|..||
Zfish  1831 EQKKASESVKGIRKYERRIKELTYQTEEDRKNLARLQDLVDKLQLKVKSYKRAAEEAEEQANSNL 1895

  Fly  1893 AKFRKAQQELEEAEERADLAEQAISKFRAKGR 1924
            .||||.|.||:|||||||:||..::|.|||.|
Zfish  1896 TKFRKLQHELDEAEERADIAESQVNKLRAKSR 1927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 12/36 (33%)
MYSc 81..777 CDD:214580 436/702 (62%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 416/671 (62%)
Myosin_tail_1 842..1897 CDD:279860 557/1054 (53%)
V_Alix_like 1557..1877 CDD:187408 168/319 (53%)
ATP-synt_B <1671..1771 CDD:304375 48/99 (48%)
TMPIT 1739..>1825 CDD:285135 50/85 (59%)
LOC100329813XP_021326090.1 Myosin_N 34..72 CDD:308391 13/37 (35%)
MYSc_class_II 99..768 CDD:276951 416/671 (62%)
SMC_N 848..1925 CDD:330553 573/1076 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 1098 1.000 Domainoid score I20
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68044
Inparanoid 1 1.050 2094 1.000 Inparanoid score I40
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D41153at33208
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - otm24867
orthoMCL 1 0.900 - - OOG6_100110
Panther 1 1.100 - - O PTHR45615
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1010.060

Return to query results.
Submit another query.