DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mhc and myh7

DIOPT Version :9

Sequence 1:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:NP_001135564.1 Gene:myh7 / 100216111 XenbaseID:XB-GENE-992453 Length:1936 Species:Xenopus tropicalis


Alignment Length:1919 Identity:1074/1919 - (55%)
Similarity:1432/1919 - (74%) Gaps:13/1919 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 EQRRID-QSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRDIKSEKVEKVNPPKF 85
            |:.||: |::|:|:|.|.::.|.|:.|:.|.:::.:|...:|..:......:|.:::..:||||:
 Frog    21 EKERIEAQNRPFDAKTSVFVIDPKQMYVKGIVQSKEGGKATVKKEDMSTVTVKDDEIFPMNPPKY 85

  Fly    86 EKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNE 150
            :||||||.||.||.|.||:||::||.|.:|||||||||..:||||..|||.......||||:|.|
 Frog    86 DKIEDMAMMTHLNEPSVLYNLKERYAAWMIYTYSGLFCATVNPYKWLPVYNPEVVNAYRGKKRQE 150

  Fly   151 VPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGA--SKKTDEAA--KS 211
            .|||||:|||.||..|||:..|||:|||||||||||.|||:||.||||:.|  .||.:|||  |.
 Frog   151 APPHIFSISDNAYQFMLTDRDNQSILITGESGAGKTVNTKRVIQYFATIAAIGDKKKEEAAPGKI 215

  Fly   212 KGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQ 276
            :|:||||::|.||:|||||||||||||||||||||||||||.||||:.||||||||||:||..|.
 Frog   216 QGTLEDQIIQANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLSSADIETYLLEKSRVTFQL 280

  Fly   277 SLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFT 341
            |.||||||||||||...|.:.|:.|:|.|.||:..||||::|||||||.||...||.|.|||||.
 Frog   281 SAERSYHIFYQIMSNKRPELIDMLLITTNPYDFPYVSQGEITVASIDDQEELMATDSAIDILGFN 345

  Fly   342 KQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVG 406
            ..||..:|::|.||||.|.|:|||:.||||||.||.|...:.:.|.|.::|:|.|.|..||:|||
 Frog   346 ADEKVGIYKMTGAVMHYGNMRFKQKQREEQAEPDGTEVADKAAYLMGLNSADLLKALCYPRVKVG 410

  Fly   407 NEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYNG 471
            |||||:|:.||||.||:|||.|.|::::|.|:|.:.|:.|||:|.||||||||||||||||::|.
 Frog   411 NEFVTKGQTVQQVYNSVGALGKSVYEKMFLWMVIRINQQLDTKQPRQHFIGVLDIAGFEIFDFNS 475

  Fly   472 FEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILEEE 536
            .|||||||||||||||||||||||||||||:|||:|.||||||||.|||:||||||||.||||||
 Frog   476 LEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELIEKPMGIFSILEEE 540

  Fly   537 SMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPL 601
            .|||||||.:|..||.:.|||||..||||||.| |:..|||::.||||.|.|||:|||:||||||
 Frog   541 CMFPKATDTSFKNKLYDQHLGKSNNFQKPKPGK-GKAEAHFSLVHYAGTVDYNISGWLDKNKDPL 604

  Fly   602 NDTVVDQFKKSQNKLLIEIFADHAGQSGGGEQAKGGRGKKGGGFATVSSAYKEQLNSLMTTLRST 666
            |:||:..::||..|||..:::.::|........|||: |||..|.|||:.::|.||.||:.||||
 Frog   605 NETVIGLYQKSSVKLLSFLYSAYSGTDADTGGKKGGK-KKGSSFQTVSALFRENLNKLMSNLRST 668

  Fly   667 QPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMCPKLL 731
            .||||||:||||.|.||.:|.:||||||.||||||||||||||||:|::|.|||.||||:....:
 Frog   669 HPHFVRCLIPNETKTPGAMDHYLVMHQLRCNGVLEGIRICRKGFPSRILYGDFKQRYKILNASAI 733

  Fly   732 ---QGVEKDKKATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARG 793
               |.:: .|||:|.::..||:...||:.|:|||||:||:||.:||.|||||.::::..||..||
 Frog   734 PEGQFID-SKKASEKLLGSIDVDHTQYKFGHTKVFFKAGLLGTLEEMRDERLAQLITRTQAMCRG 797

  Fly   794 YLSRKGFKKLQEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLEEKAKKA 858
            ||.|..|:::.|:|.::..:|.|:|.::.::.|||.||:.|:||||..:..|.|:..::|:.:|.
 Frog   798 YLMRVEFRQMMERRESIFCIQYNVRSFMNVKHWPWMKLYFKIKPLLKSAESEKEMQNMKEEFEKT 862

  Fly   859 EELHAAEVKVRKELEALNAKLLAEKTALLDSLSGEKGALQDYQERNAKLTAQKNDLENQLRDIQE 923
            :|..|.....|||||.....:|.||..|...::.|...|.|.:||...|...|..||.::::..|
 Frog   863 KEALAKSEAKRKELEEKMVAILQEKNDLQLQVTSESEGLADAEERCEGLIKAKIQLEAKIKEANE 927

  Fly   924 RLTQEEDARNQLFQQKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELI 988
            ||..||::..:|..:|:|.:.|.|.|||||:||||.:.|.|::|...:::::||.:|:|..||.|
 Frog   928 RLEDEEESNAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAVLDETI 992

  Fly   989 NKLNKEKKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRK 1053
            .||.||||...|.:|:|.::|||.|||:|.|.|.|.||||.:|:||.|||:|||:|.|:|::|||
 Frog   993 AKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLRMDMERAKRK 1057

  Fly  1054 VEGDLKLTQEAVADLERNKKELEQTIQRKDKELSSITAKLEDEQVVVLKHQRQIKELQARIEELE 1118
            :||||||.||:..|||.::::|::.:::|:.|:|.:.:|:||||.:..:.|::||||||||||||
 Frog  1058 LEGDLKLAQESTMDLENDRQQLDEKVKKKEFEISQLQSKIEDEQALAAQLQKKIKELQARIEELE 1122

  Fly  1119 EEVEAERQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQ 1183
            ||:||||.|||||||||:||:|||||:.|||||||||||||||:|||||||..|:|||||||.:|
 Frog  1123 EEIEAERAARAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQ 1187

  Fly  1184 HESTLANLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIA 1248
            ||:|.:.||||..|:|||:.||:|.|.::|.|.||||:|...:::||.:.::.::..|:..||:.
 Frog  1188 HEATASALRKKQADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNMESVSKAKSNLEKMC 1252

  Fly  1249 KQLQHTLNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLED 1313
            :.|:...:||::|.||..|.:||.:|.:.:|..||.:..|||||.||.:||||:.|.:.|.|.|:
 Frog  1253 RTLEDQFSEVKTKEDEHLRVINDINAQRARLHTENGEYARQLEEKESLISQLSRGKQAFTQQTEE 1317

  Fly  1314 TKRLADEESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDG 1378
            .||..:||::.:..|....::..||.|.||||.|||.|.|.:|||.|||||:|...||:|||:|.
 Frog  1318 LKRQLEEETKAKNALAHGLQSARHDCDLLREQYEEEQEAKGELQRSLSKANSEVSQWRTKYETDA 1382

  Fly  1379 VARSEELEEAKRKLQARLAEAEETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEK 1443
            :.|:|||||||:||..||.||||.||::|.||..||||||||..|||||.::|:|:|:...|.:|
 Frog  1383 IQRTEELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMVDVERSNSACAALDK 1447

  Fly  1444 KQKAFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEV 1508
            |||.|||::.:||.|.::..|||:|||||.|:.|||:|::|.:|||..:|||.::||||||..|:
 Frog  1448 KQKNFDKVLADWKQKFEESQAELEASQKESRSLSTEVFKMKNSYEEALDQLETLKRENKNLQQEI 1512

  Fly  1509 KDLLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDR 1573
            .||.:|:.|.|::|||||||:|::|:||.:|||||||||.:||.||.|:||.||||:||:.||||
 Frog  1513 SDLTEQVAEAGKSIHEIEKAKKQIESEKSDLQAALEEAEGSLEHEEAKILRIQLELNQVKGEIDR 1577

  Fly  1574 RIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAEA 1638
            :|.||:||.|..::|.||||:|||::|:||.:.:.:|||:|||:|.|:||:||.|.|||:..||:
 Frog  1578 KIAEKDEEIEQLKRNSQRALESMQSTLDAEIRSRNDALRLKKKMEGDLNEMEIQLSHANRQAAES 1642

  Fly  1639 QKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQ 1703
            ||.::..|..|||.|..|::.||..||.:|||.|.|||.|.:..|:||.|:.|||.:|||:.|||
 Frog  1643 QKQLRNVQGLLKDTQLHLDDAQRGNDDLKEQLAIVERRNNLMTAEIEEMRSALEQTERGRKVAEQ 1707

  Fly  1704 ELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSEEKAKKAMVDAARLADEL 1768
            ||.|..|::..:.:||.|:...|:|:|:::..|.|:::|.:.||:|::||||||:.|||.:|:||
 Frog  1708 ELIDVTERVQLLHSQNTSLINTKKKIEADVSQLQSEVEEAVQEARNADEKAKKAITDAAMMAEEL 1772

  Fly  1769 RAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHA 1833
            :.|||.:...|:::|.|||.:|:||.||||||..|:|||||.:||||.||||||||||.||:|.:
 Frog  1773 KKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLAMKGGKKQLQKLEARVRELENELDAEQKRGS 1837

  Fly  1834 DAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKA 1898
            ||.|.:||.||||||||:|||||:||..|:||||||||.|:|.||||.|:.||.|.::|::||||
 Frog  1838 DAIKGVRKFERRVKELSYQSEEDKKNVFRLQDLVDKLQLKVKAYKRQSEDVEEQANVHLSRFRKA 1902

  Fly  1899 QQELEEAEERADLAEQAISKFRAKGRAGSVGRGA 1932
            |.||||||||||:||..::|.|||.|  .:|:.|
 Frog  1903 QHELEEAEERADIAESQVNKLRAKSR--DIGKKA 1934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 7/36 (19%)
MYSc 81..777 CDD:214580 450/702 (64%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 429/671 (64%)
Myosin_tail_1 842..1897 CDD:279860 558/1054 (53%)
V_Alix_like 1557..1877 CDD:187408 179/319 (56%)
ATP-synt_B <1671..1771 CDD:304375 46/99 (46%)
TMPIT 1739..>1825 CDD:285135 50/85 (59%)
myh7NP_001135564.1 Myosin_N 36..73 CDD:280832 7/36 (19%)
Myosin_head 88..769 CDD:278492 438/683 (64%)
Motor_domain 100..769 CDD:277568 429/671 (64%)
Synaphin 847..955 CDD:283491 35/107 (33%)
Myosin_tail_1 849..1926 CDD:279860 576/1076 (54%)
RILP-like 964..1097 CDD:304877 63/132 (48%)
DUF342 <1155..1240 CDD:302792 51/84 (61%)
MIT_CorA-like <1298..>1410 CDD:294313 60/111 (54%)
COG6 1375..>1538 CDD:303003 93/162 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D41153at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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