DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mhc and myh6

DIOPT Version :10

Sequence 1:NP_523587.4 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster
Sequence 2:XP_002939062.2 Gene:myh6 / 100216059 XenbaseID:XB-GENE-968718 Length:1937 Species:Xenopus tropicalis


Alignment Length:63 Identity:17/63 - (26%)
Similarity:27/63 - (42%) Gaps:14/63 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 WPTIYTLGFTGGTKLLT-------IFSNVKYCSAMLKLVALRHCLARVAQDRAEKELNEIISM 265
            |.:..|...| .|.:.|       |.|:.|:.|     |.:|....:.|||:|..: .|.:|:
 Frog   255 WQSSETRSIT-NTTVCTKCGGAGHIASDCKFTS-----VTVRPGEPQSAQDKARMD-KEYLSL 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MhcNP_523587.4 Myosin_N 33..75 CDD:460670
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 17/63 (27%)
Myosin_tail_1 842..1922 CDD:460256
myh6XP_002939062.2 Myosin_N 32..76 CDD:460670
MYSc_class_II 99..766 CDD:276951 17/63 (27%)
Myosin_tail_1 846..1923 CDD:460256
Blue background indicates that the domain is not in the aligned region.

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