DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk17 and asic2

DIOPT Version :9

Sequence 1:NP_001285988.1 Gene:ppk17 / 35006 FlyBaseID:FBgn0032602 Length:431 Species:Drosophila melanogaster
Sequence 2:XP_005164179.1 Gene:asic2 / 407669 ZFINID:ZDB-GENE-040513-4 Length:564 Species:Danio rerio


Alignment Length:500 Identity:87/500 - (17%)
Similarity:160/500 - (32%) Gaps:139/500 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 YLVLFACCIVVIV-----QLYECFAKLYNPPISTHSYYSLNETIEMPSVTICREPPYKEEVLTR- 79
            :::.|..|:.:::     :|....|.    |..|..:....:.:..|:||||...|.:...||: 
Zfish    92 WMIAFCTCLGLLLSWSSNRLLHWLAF----PTHTRVHTEWAKELAFPTVTICNNNPVRLYHLTKS 152

  Fly    80 -----------LSGGACPHP---------------KYATCWMKYP---FGEISLDEFFENSTHDS 115
                       |.......|               |.:...:..|   |...|| ||.:...|..
Zfish   153 DLYFAGHWLGLLLANRTARPLVLDLLQDDRRGWFSKLSDFRLFLPPRRFEGTSL-EFMDRLGHQL 216

  Fly   116 GDTFVFYGLNEDKNNVVMNSSLHFYMGRCYTLRPKESAKRVSKAV------GYSIML----EHSM 170
            .|..:......:.......|::....|:||.....|..|.:...:      |..|||    :..:
Zfish   217 EDMLLACKYRGEPCGAHNFSTVFTRYGKCYMFNAAEEGKTLRTTMKGGTGNGLEIMLDIQQDEYL 281

  Fly   171 LTTSVSDVDTGSVGWHVFIHDKKE-------------NFTEINMKGSGRVEYVFVGVNEEIEIKL 222
            .....::......|..|.||.:.|             .|.........|:.|:.....|.:...|
Zfish   282 PVWGETEETAFEAGVRVQIHSQAEPPFVHELGFGVAPGFQTFVATQEQRLTYLPPPWGECVSRAL 346

  Fly   223 QTQYFSNVQTREEACSDDENYSDLKCGEQCIWQDLADNMQC-----------SGPWMHEIASEPC 276
            .:..|             :.||...|..:|..:.:.:|..|           ..|..::..:||.
Zfish   347 DSGLF-------------QVYSVSACRIECETRYIVENCNCRMVYMPGDSPYCTPEQYKDCAEPA 398

  Fly   277 NDSLSMRKLISDYKDVYENEDDFDCDCVQPCQSRIY------------TTFIQNRKAFNQPEPRT 329
            ..:||.             .:..:|.|..||....|            |:.....|.||:.|.  
Zfish   399 LAALSA-------------VEGTNCICRSPCNMTRYNKELSMVKIPSKTSARYLEKKFNRSEK-- 448

  Fly   330 QIYIYYTTKLISM-----------IEERPSYDTTQFIADVGGSLGFLLGLSVLGLIGILEHMMLF 383
                |.|..::.:           ||::.:|:....:.|:||.:|..:|.|:|.|:.:.::....
Zfish   449 ----YITDNILVLDVFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTLLELFDYAYEV 509

  Fly   384 FCGGFIKRMQQKEQAKLEANSED--------GQSQTSDETIDVEI 420
            .....:..:.::|:.  |::.||        ..|::...|:.|.:
Zfish   510 VKERLLDLLNREEEE--ESHGEDVSTCDPVVNHSESISHTVSVPL 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk17NP_001285988.1 ASC 11..358 CDD:295594 72/428 (17%)
asic2XP_005164179.1 ASC 71..538 CDD:295594 84/484 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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