DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk17 and Scnn1b

DIOPT Version :9

Sequence 1:NP_001285988.1 Gene:ppk17 / 35006 FlyBaseID:FBgn0032602 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_036780.1 Gene:Scnn1b / 24767 RGDID:3640 Length:638 Species:Rattus norvegicus


Alignment Length:546 Identity:98/546 - (17%)
Similarity:168/546 - (30%) Gaps:208/546 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 VLFACCIV----VIVQLYECFAKLYNPPISTHSYYSLN---ETIEMPSVTICREPPYK------- 73
            :||||.:.    |.:|.|          :|.....||:   :|:..|:||:|...|::       
  Rat    57 LLFACLVCWQWGVFIQTY----------LSWEVSVSLSMGFKTMNFPAVTVCNSSPFQYSKVKHL 111

  Fly    74 --------EEVLTRLSGGACPHPKYA-----TCWMKYPFGEISLDE----------FFENSTHDS 115
                    |.||.::......|....     |.|...|.  :.:||          .|.:| |:|
  Rat   112 LKDLYKLMEAVLDKILAPKSSHTNTTSTLNFTIWNHTPL--VLIDERNPDHPVVLNLFGDS-HNS 173

  Fly   116 GD----------------------------------------------TFVF--------YGLNE 126
            .:                                              |.:|        .|:..
  Rat   174 SNPAPGSTCNAQGCKVAMRLCSANGTVCTFRNFTSATQAVTEWYILQATNIFSQVLPQDLVGMGY 238

  Fly   127 DKNNVVM------------NSSLHFY--MGRCYTLRPKESAKRVSKA-----VGYSIMLEHSMLT 172
            ..:.:::            |.:..||  .|.||......:.|.:..|     .|..::|:     
  Rat   239 APDRIILACLFGTEPCSHRNFTPIFYPDYGNCYIFNWGMTEKALPSANPGTEFGLKLILD----- 298

  Fly   173 TSVSDVD-----TGSVGWHVFIHDKKENFTEINMKGSGRVEYVFVGVNEEIEI---KLQ------ 223
              :...|     ..:.|..:.:|::: .:..|..:|.    |...|....|.:   |||      
  Rat   299 --IGQEDYVPFLASTAGARLMLHEQR-TYPFIREEGI----YAMAGTETSIGVLLDKLQGKGEPY 356

  Fly   224 ---TQYFSNVQTREEACSDDENYSDLKCGEQCIWQDLADNMQCS------------------GPW 267
               |...|:|..:......:..||...|...|....:..|..|.                  ..|
  Rat   357 SPCTMNGSDVAIQNLYSDYNTTYSIQACLHSCFQDHMIHNCSCGHYLYPLPAGEKYCNNRDFPDW 421

  Fly   268 MH----------------EIASEPCNDS-LSMRKLISDYKDVYENEDDFDCDCVQPCQSRIYTTF 315
            .:                .:..|.|||: ..|...::|:..  |..:|:....:.  |.|..::.
  Rat   422 AYCYLSLQMSVVQRETCLSMCKESCNDTQYKMTISMADWPS--EASEDWILHVLS--QERDQSSN 482

  Fly   316 IQ-NRKAFNQPEPRTQIYIYYTTKLISMIEERPSYDTTQFIADVGGSLGFLLGLSVLGLIGILEH 379
            |. :||..      .::.||:.......|||.|:.:....::::||..||.:|.|||.||...|.
  Rat   483 ITLSRKGI------VKLNIYFQEFNYRTIEESPANNIVWLLSNLGGQFGFWMGGSVLCLIEFGEI 541

  Fly   380 MMLFF----------CGGFIKRMQQK 395
            ::.|.          |.|..:|..|:
  Rat   542 IIDFIWITVIKLVASCKGLRRRRPQR 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk17NP_001285988.1 ASC 11..358 CDD:295594 82/497 (16%)
Scnn1bNP_036780.1 ENaC 21..621 CDD:273304 98/546 (18%)
deg-1 29..538 CDD:273309 92/515 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345645
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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