DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk17 and asic-2

DIOPT Version :9

Sequence 1:NP_001285988.1 Gene:ppk17 / 35006 FlyBaseID:FBgn0032602 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:523 Identity:105/523 - (20%)
Similarity:179/523 - (34%) Gaps:155/523 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QLYECFAKLYNPPISTHSYYSLNETIEMPSVTICREPPYKEEVLTRLSGGACPHPKYATCWMKYP 98
            :||...||.::.|.:.::.....:.| .|.||:|...|||..|:...|..:..: ...|.:....
 Worm    51 ELYILIAKFFSYPATVNTEILFEKQI-FPVVTVCNMNPYKYSVVKSNSAFSSVN-TLMTTYSDAT 113

  Fly    99 FGEISLDE---FFEN-STHD----SGDTFVFYGLNEDKNNVVMNS----SLHFY----------- 140
            .|..|.|:   :.:| .|:|    :.|..|.      :.|::.::    :|:.|           
 Worm   114 VGTFSTDKWGLYADNDETYDLDSRAADALVL------EANLISDTAKVPALYTYADLIQDCSFAG 172

  Fly   141 ---------------MGRCYTLRP----KESAKRVSKAVGYSIML----------EHSMLTTSVS 176
                           .|.||:...    ..|..|.....|..:||          ..|:.||.::
 Worm   173 IPCSESDFTKFIDPVYGACYSFNEDASLNYSVSREGIQFGLKLMLTVTQTKTNGNTDSLPTTKLA 237

  Fly   177 DVDTGSVGWHVFIHDKKENFTEINMKGS-------------GRVEYVFVGVNEEIEIKLQTQYFS 228
            ....|                 :|.:||             |....|.|.:.:.:..|   :.:.
 Worm   238 GARIG-----------------VNSRGSSPGLDSNGIDAGVGYESAVSVSLTQNVRAK---KPYG 282

  Fly   229 NVQTREEACSD---DENYSDLKCGEQCIWQDLADNMQCSGPWM----HEIASEPCNDSLS-MRKL 285
            ....||...||   |..|:...|...|..:|.....||:.|.:    .:.|.:|....|. ::.|
 Worm   283 TCVDREPDSSDYYKDFIYTLETCFNGCKQRDTIAKCQCANPRLALGSTDTACQPIKADLDCLQTL 347

  Fly   286 ISDYKDVYENEDDF-DCDCVQPCQSRIYTTFIQ-------------------------NRKAFNQ 324
            ..:......|.|.. :|:|..||....||..:.                         |.|..::
 Worm   348 KGNQTSSTPNIDLLVECNCNPPCDESTYTPTVSLAQFPSTSYYVATSSTAGVGSCSSTNSKFSSK 412

  Fly   325 PEPRTQ-------IYIYYTTKLISMIEERPSYDTTQFIADVGGSLGFLLGLSVLGLIGILEHMML 382
            .:.:..       |.::..|....:..|...|..:..|.|:||..|..|||||:.::.:...|::
 Worm   413 SDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLWLGLSVISVVEMTGLMLV 477

  Fly   383 F--FC--GGFIK------------RMQQKEQAKLEAN---SEDGQSQT-SDETIDVEIAYKKKEK 427
            .  ||  ||.||            |::..|..|.|.:   .:.|:.:: ||..:| :|..|..|:
 Worm   478 MGAFCVTGGAIKMAPDDDEIENDHRIKDVEDVKKEIDHLEKKHGEMESGSDGEVD-DIENKGDEE 541

  Fly   428 QPK 430
            :.|
 Worm   542 KKK 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk17NP_001285988.1 ASC 11..358 CDD:295594 77/429 (18%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 86/450 (19%)
ASC 13..471 CDD:279230 86/447 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.