DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk17 and del-4

DIOPT Version :9

Sequence 1:NP_001285988.1 Gene:ppk17 / 35006 FlyBaseID:FBgn0032602 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:510 Identity:101/510 - (19%)
Similarity:180/510 - (35%) Gaps:146/510 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LFACCIVVIVQLYECFAKLYNPPISTHSYYSLN-ETI------EMPSVTICREPPYKEEVLTRLS 81
            |.|..|:|:|.....|...:...::.:..:|:| ||.      ..|:||||...|:|      ||
 Worm    35 LRAFWILVVVVSIALFIWQFITLLTNYLSFSVNTETTLQFAERTFPTVTICHLNPWK------LS 93

  Fly    82 GGACPHPKYATCWMKYPFGEISLDEFFENSTHDSGDTFVFYGLNEDKNNVVMNSSLHFYMGRCYT 146
            ......|..:..          :|.:  ||...|....:...|..|:.......:|      .|:
 Worm    94 ETKSVDPDMSAL----------IDAY--NSDSSSAQFGLPASLTADRQQQASKWTL------MYS 140

  Fly   147 LRPKESAKRVSKAVGYS-----IMLEHSMLTTSVSDVDTGSVGWHVFIHDKKENFTEINMKG--- 203
            .|..|.....:..:.||     :...::..|.:::|       ::.|.:....|..:.|..|   
 Worm   141 ERLNEKQYNDAADIAYSYDDMVVSCTYNAKTCNITD-------FNDFYNPSYGNCLQFNTDGMYS 198

  Fly   204 SGRVEYVF-----VGVNEE------------IEIKLQTQ--------YF-----------SNVQT 232
            |.|...::     :..:::            |:|.:|.:        ||           |.|||
 Worm   199 SSRAGPLYGLRMVMRTDQDTYLPWTEASGVIIDIHMQDEIPYPDVFGYFAPPGTASSLGVSYVQT 263

  Fly   233 RE-----EACSDDE---------NYSDLKCGEQCIWQDLADNMQCSGP-WMHEIASE-----PCN 277
            ..     .:|:...         .|:...|...|:.:.:..:..|..| :.|  ||.     .|:
 Worm   264 TRLSKPYGSCTTKTKLKTTHYTGTYTVEACFRSCMQEKIIASCGCYYPAYSH--ASNTTQYVSCD 326

  Fly   278 D---SLSMRKLISDYKDVYENEDDF--DCDCVQPCQSRIYTTFIQNRKAFNQPEPRTQ------- 330
            :   :||....:.........|.|.  ||||.|||:...|...:...:..:.....|:       
 Worm   327 NGVQTLSNLNCVDLINSADSTEFDVLTDCDCPQPCEIDSYGVTVSTAQWPSDSYVPTECNPGGPS 391

  Fly   331 --------------------IYIYYTTKLISMIEERPSYDTTQFIADVGGSLGFLLGLSVLGLIG 375
                                |.|||......::.|.|:|....||:||||.:|..||:|::..|.
 Worm   392 GPWDASGESCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIE 456

  Fly   376 --ILEHMMLFFCGGFIKRMQQKEQAKLEANSEDGQSQTSDETIDVEIAYKKKEKQ 428
              :|..::.|:|.....|..:.||.:::.       :.:.:.:| ::|.|:|:.|
 Worm   457 YLVLIFLVFFYCCTHKSRRAEIEQLEMDI-------KKAKDDVD-QVAEKRKKHQ 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk17NP_001285988.1 ASC 11..358 CDD:295594 81/436 (19%)
del-4NP_492230.2 ASC 8..466 CDD:295594 91/463 (20%)
deg-1 14..460 CDD:273309 90/457 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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