DRSC/TRiP Functional Genomics Resources

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Protein Alignment yellow-b and RGN

DIOPT Version :9

Sequence 1:NP_001285987.1 Gene:yellow-b / 35005 FlyBaseID:FBgn0032601 Length:453 Species:Drosophila melanogaster
Sequence 2:NP_004674.1 Gene:RGN / 9104 HGNCID:9989 Length:299 Species:Homo sapiens


Alignment Length:195 Identity:39/195 - (20%)
Similarity:63/195 - (32%) Gaps:53/195 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PRWRDGVPASLAYLDLNDTSSKGPALKPFPSWQAHNLQEAEPELVSPFRVRADR----------- 125
            |.|.: |..||.::|:       || |....|.:...|.....:.:|....|.|           
Human    20 PVWEE-VSNSLLFVDI-------PA-KKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATIGT 75

  Fly   126 --CGRLWVLDSRISGVLEQTKIYGAAQLLVYDLHNDDLLRR----HVLPAGQLKQGSLLANLAVE 184
              |...|             |...|..|...|  ||....|    .|.|||:...|::....|..
Human    76 KFCALNW-------------KEQSAVVLATVD--NDKKNNRFNDGKVDPAGRYFAGTMAEETAPA 125

  Fly   185 DSDCENTFAYAADLGSPGLVVYSWKDEE------SWRVQHH-FFHPDPMAGNFSINGIEFQWDDG 242
            ..:......|:.   .|...|..:.|:.      .|.:.|. |::.|.:  ::|::..::....|
Human   126 VLERHQGALYSL---FPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL--SYSVDAFDYDLQTG 185

  Fly   243  242
            Human   186  185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
yellow-bNP_001285987.1 MRJP 116..402 CDD:281074 28/151 (19%)
RGNNP_004674.1 SGL 16..264 CDD:400653 39/195 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3386
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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