DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment BuGZ and SUF4

DIOPT Version :9

Sequence 1:NP_001260513.1 Gene:BuGZ / 35004 FlyBaseID:FBgn0032600 Length:622 Species:Drosophila melanogaster
Sequence 2:NP_001322001.1 Gene:SUF4 / 839984 AraportID:AT1G30970 Length:391 Species:Arabidopsis thaliana


Alignment Length:394 Identity:136/394 - (34%)
Similarity:184/394 - (46%) Gaps:75/394 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRKKKKAS-KPWCWYCNREFDDEKILVQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKETVDK 64
            ||:|||:|: |.||:||:|||||||||||||||||||||:|||||.|..|:.||.:|||||.|.|
plant     1 MGKKKKRATEKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTASGMVIHVLQVHKENVTK 65

  Fly    65 VPNSLPNRSNIEVEIFGMDGIPAEDLRDHERQKNGGKSDSDDDEPVAK-KKVEYAMS-----VPP 123
            |||:...|.:.::||:||.|||...|..|..:        ::|||.|| .|||...:     ||.
plant    66 VPNAKDGRDSTDIEIYGMQGIPPHVLTAHYGE--------EEDEPPAKVAKVEIPSAPLGGVVPR 122

  Fly   124 P--MMMPPNMMPPHMLGQYGMGMMQHMP---PLPP--YPVPMMPHMMPPRP--LFPAAMATTSAA 179
            |  |:.||..:|         |.:...|   |.||  :|.|:. .|.||||  .:|    ...|.
plant   123 PYGMVYPPQQVP---------GAVPARPMYYPGPPMRHPAPVW-QMPPPRPQQWYP----QNPAL 173

  Fly   180 AAAAAAHHHHAAAMAQQKPTFPAYSNATISAPPTTNHAGGASSAPPSG--PPDAQQHQQRPPAP- 241
            :...|||..:     :.:|.||..:   :...||...|.....:|.:|  ||.........|.| 
plant   174 SVPPAAHLGY-----RPQPLFPVQN---MGMTPTPTSAPAIQPSPVTGVTPPGIPTSSPAMPVPQ 230

  Fly   242 ---PAASGTSAAAVTTKIMHPQEDLSLEELRARQPKIQARLAAALASLAN---PQSRKSPSNNGG 300
               |..:.:..:..      |.....|....|:||.....|.:|.|...|   |....:.|...|
plant   231 PLFPVVNNSIPSQA------PPFSAPLPVGGAQQPSHADALGSADAYPPNNSIPGGTNAHSYASG 289

  Fly   301 PSTSIPTTPPPPSLAGISPTGSNSSSGMANSIVV---SAAMSKAQENAALVAVAQAQAHAHAHAA 362
            |:||.|:..|||.:|..:|      |...|.:.:   ..|||..:...:|     .:...|...:
plant   290 PNTSGPSIGPPPVIANKAP------SNQPNEVYLVWDDEAMSMEERRMSL-----PKYKVHDETS 343

  Fly   363 QVQA 366
            ||.:
plant   344 QVSS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BuGZNP_001260513.1 C2H2 Zn finger 13..32 CDD:275368 16/18 (89%)
C2H2 Zn finger 37..58 CDD:275368 12/20 (60%)
PABP-1234 <479..607 CDD:130689
SUF4NP_001322001.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 169 1.000 Domainoid score I1169
eggNOG 1 0.900 - - E1_KOG2893
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 170 1.000 Inparanoid score I1550
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004631
OrthoInspector 1 1.000 - - oto3607
orthoMCL 1 0.900 - - OOG6_102795
Panther 1 1.100 - - LDO PTHR23215
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3245
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.910

Return to query results.
Submit another query.