DRSC/TRiP Functional Genomics Resources

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Protein Alignment LSm7 and SMX2

DIOPT Version :10

Sequence 1:NP_609807.1 Gene:LSm7 / 35003 FlyBaseID:FBgn0261068 Length:110 Species:Drosophila melanogaster
Sequence 2:NP_116636.1 Gene:SMX2 / 850528 SGDID:S000002965 Length:77 Species:Saccharomyces cerevisiae


Alignment Length:79 Identity:27/79 - (34%)
Similarity:46/79 - (58%) Gaps:8/79 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DLSKYLEKQIRVKFAGGREASGILKGYDALLNLVLDNTVEYLRDSDEPYKLTEEQTRSLGL-VVC 86
            :|.||::|:|.:...|.|:.:|||:|||..||:|||:.:|.  :.::|     .....||| .|.
Yeast     6 ELKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDDAMEI--NGEDP-----ANNHQLGLQTVI 63

  Fly    87 RGTALVLICPQDGV 100
            ||.:::.:...|.:
Yeast    64 RGNSIISLEALDAI 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LSm7NP_609807.1 LSm7 18..107 CDD:212476 27/79 (34%)
SMX2NP_116636.1 Sm_G 3..75 CDD:212466 26/75 (35%)

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